Job Description P39220 Confidence 32.03% Date Thu Jan 5 11:58:32 GMT 2012 Rank 4 Aligned Residues 76 % Identity 22% Template c1v0dA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dna fragmentation factor 40 kda subunit; PDBTitle: crystal structure of caspase-activated dnase (cad) Resolution 2.6 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	I	Y	K	M	V	S	G	D	K	M	D	V	K	M	N	I	F	Q	R	L	W	E	T	L	R	H	L	F	W	S	D	K	Q	T	E	A	Y	K	L	L	F	N	F	V	N	N	Q	T	G	N	I	N	A	S	.	.	.	.	.	.	E	Y	F	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																																							.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		S	D	I	T	R	F	L	S	V	F	N	E	P	.	.	.	.	.	H	A	G	V	I	Q	A	A	R	Q	Q	L	S	D	E	Q	A	P	L	R	Q	K	L	L	A	D	L	L	H	H	V	S	Q	N	I	T	A	E	T	R	E	Q	D	P	S	W	F	E	G	L	E	S	R	F	R	N	K	S	G	Y	L	R
Template Known Secondary structure		T	T								T	T	S		.	.	.	.	.	S	S	T	T										S																		S			T	T			B	T	T	T		T	T	T	T	T	T	S		T	T			B
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
																					79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	N	E	N	E	R	E	K	F	I	N	S	L	E	L	F	N	K	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	C	E	S	R	I	R	G	Y	L	R	E	V	S	A	Y	T	S	M	V	D	E	A	A	Q	E	E	Y	L	R	V	L	G	S	M	C	Q	K
Template Known Secondary structure																	T	T	G	G	G	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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