Job Description P07023 Confidence 96.64% Date Thu Jan 5 11:00:05 GMT 2012 Rank 468 Aligned Residues 91 % Identity 16% Template c3uagA_ PDB info PDB header:ligase Chain: A: PDB Molecule:protein (udp-n-acetylmuramoyl-l-alanine:d- PDBTitle: udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase Resolution 1.77 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		Q	G	K	N	V	V	I	I	G	.	L	G	L	T	G	L	S	C	V	D	F	F	L	A	R	G	V	T	P	R	V	M	D	T	R	M	T	P	P	G	L	D	K	L	P	E	A	V	E	R	H	T	G	S	L	N	D	E	W	L	M	A	A	D	L	I	V	A	S	P	G	I	A	L	A	H	P	S	L	S
Template Known Secondary structure		T	T								.		S												T	T	T								S	S	S	S		T	T	G	G	G	S		T	T	S					S	S							T	T		S						T	T	S		T	T	S
Template Predicted Secondary structure											.
Template SS confidence
		4	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		161	.	.	.															.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	D	A	G	I	E	I	V	G	D	I	E	L	F	C	R	E	A	Q	A	P	I	V	A	I	T	G	S	N	G	K	S	T	V	T	T	L	V	G	E
Template Known Secondary structure						T	T																S								S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions