Job Description P07023 Confidence 99.52% Date Thu Jan 5 11:00:05 GMT 2012 Rank 46 Aligned Residues 232 % Identity 15% Template c3qsgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-binding phosphogluconate dehydrogenase-like protein; PDBTitle: crystal structure of nad-binding phosphogluconate dehydrogenase-like2 protein from alicyclobacillus acidocaldarius Resolution 1.90 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.																.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																													.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	.	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G	K	L
Query Conservation																													.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																				.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		X	K	L	G	F	I	G	.	F	G	E	A	A	S	A	I	A	S	G	L	R	Q	A	G	A	I	D	X	A	A	Y	D	A	A	S	A	E	S	W	R	P	R	A	E	E	L	G	V	S	C	K	A	S	V	A	E	V	A	G	E	C	D	V	I	F	S	L	V	T	A	Q	A	A	L	E	V	A	Q	Q	A
Template Known Secondary structure									.		S														S									S	S												T	T					S										S						S		T	T	T
Template Predicted Secondary structure									.
Template SS confidence
		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		163	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure				.																										.	.	.	.	.
Query SS confidence				.																										.	.	.	.	.
Query Sequence		P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	.	.	.	.	.	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R
Query Conservation				.																										.	.	.	.	.
Alig confidence				.																										.	.	.	.	.								.																							.	.	.	.
Template Conservation																																										.																							.	.	.	.
Template Sequence		G	P	H	L	C	E	G	A	L	Y	A	D	F	T	S	C	S	P	A	V	K	R	A	I	G	D	V	I	S	R	H	R	P	S	A	Q	Y	A	A	V	.	A	V	X	S	A	V	K	P	H	G	H	R	V	P	L	V	V	D	G	D	G	A	.	.	.	.	R	R	F	Q	A	A	F	T	L	Y	G	C	R
Template Known Secondary structure		G	G	G			T	T																										T	T							.				S		S	T	T	T	G	G	G	S						S	T	T		.	.	.	.									T	T	T
Template Predicted Secondary structure																																										.																							.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.
		237	.	.	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		L	H	R	I	.	.	.	.	S	A	V	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E	N	V	Q	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L	F	A	Q	D	P	Q	L	Y	A	D	I	I	M	S	S	E	R
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																																						.	.	.	.	.	.	.				.	.	.	.										.	.
Template Conservation																																															.	.	.	.	.	.	.				.	.	.	.										.	.
Template Sequence		I	E	V	L	D	G	E	V	G	G	A	A	L	L	K	X	C	R	S	A	V	L	K	G	L	E	A	L	F	L	E	A	L	A	A	A	E	K	X	G	L	A	D	R	V	.	.	.	.	.	.	.	L	A	S	.	.	.	.	L	D	A	S	F	P	E	H	H	.	.	L	R	D	L	A	L	Y	L	V	E
Template Known Secondary structure							S	S	T	T																													T	T	T						.	.	.	.	.	.	.				.	.	.	.					S	G	G	G	T	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.				.	.	.	.										.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.								200	.	.					.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.
		313		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																							.	.	.	.	.
Query SS confidence			.																							.	.	.	.	.
Query Sequence		N	.	L	A	L	I	K	R	Y	Y	K	R	F	G	E	A	I	E	L	L	E	Q	G	D	.	.	.	.	.	K	Q	A	F	I	D	S	F	R	K	V	E	H	W
Query Conservation			.																							.	.	.	.	.
Alig confidence			.																							.	.	.	.	.
Template Conservation
Template Sequence		R	N	L	E	H	A	D	R	R	A	H	E	L	G	E	V	A	A	T	L	C	S	V	G	V	E	P	L	V	A	E	A	G	Y	R	R	L	T	R	V	A	Q	V
Template Known Secondary structure																								T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions