Return to main results Retrieve Phyre Job Id

Job DescriptionP07023
Confidence97.30%DateThu Jan 5 11:00:05 GMT 2012
Rank339Aligned Residues102
% Identity11%Templatec3q2kB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca
Resolution2.13 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   97..100.........110.........120. ..... ...130.. .......140. ........150.......
Predicted Secondary structure 






..

.


..............
..




Query SS confidence 
























. .




.





. . . . . . . . . . . . . .








. .















Query Sequence  SLRPVVIVGGGGQMGRLFEKMLTLS. . GYQVR. ILEQHD. . . . . . . . . . . . . . WDRAADIVA. . DAGMVIVSVPIHVTEQ
Query Conservation      
 



 
 

   
  
   ..
  
 .
 
   ..............         .. 









     
Alig confidence 








.














..




.





..............








..















Template Conservation 
 


 


. 
  
               



 
                       

     
 
 
 

   
  
Template Sequence  RKIRFGLVG. CGRISKNHIGAIAQHGDRAELVEICDTNPEALQAAEAATGARPFSSLSDMLAQGNADALVLATPSGLHPW
Template Known Secondary structure 


.
STTTT
TTT
SS

B

SS


S
S
GGG
Template Predicted Secondary structure 

.
























Template SS confidence 















































































   910....... ..20.........30.........40.........50.........60.........70.........80.......
 
   158.160.........170.........180......... 190.........
Predicted Secondary structure 










...






Query SS confidence 































. . .









Query Sequence  VIGKLPPLPKDCILVDLASVKNGPLQAMLVAH. . . DGPVLGLHPM
Query Conservation   
     
    

 

 


           ...    

 


Alig confidence 































...









Template Conservation      
   

 

 


 
    
   
   
             
Template Sequence  QAIEVAQAGRHVVSEKPMATRWEDGKRMVKACDEAGVRLFVVKQN
Template Known Secondary structure  TT

SSS
SST



GG
Template Predicted Secondary structure 
















Template SS confidence 












































   88.90.........100.........110.........120.........130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions