Job Description P07023 Confidence 99.03% Date Thu Jan 5 11:00:05 GMT 2012 Rank 101 Aligned Residues 225 % Identity 16% Template c3prjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase. Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.																																	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	.	.	Y	Q	V	R	I	L	E	Q	H	D	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	A	A	D	I	V	A	D	A	G
Query Conservation																										.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		K	K	I	C	C	I	G	.	A	G	Y	V	G	G	P	T	C	S	V	I	A	H	M	C	P	E	I	R	V	T	V	V	D	V	N	E	S	R	I	N	A	W	N	S	P	T	L	P	I	Y	E	P	G	L	K	E	V	V	E	S	C	R	G	K	N	L	F	F	S	T	N	I	D	D	A	I	K	E	A	D
Template Known Secondary structure									.		S	T	T													T	T	S							S										S	S	S		S	S			T	T									B	T	T	T					S								T		S
Template Predicted Secondary structure									.
Template SS confidence
		5	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		145	.	.	.	.	150	.																.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.															.	.	.																										.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.															.	.	.																										.	.
Query Sequence		M	V	I	V	S	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	V	T	E	Q	V	I	G	K	L	P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	.	.	.	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	.	.
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.															.	.	.																										.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.															.	.	.																										.	.
Template Conservation
Template Sequence		L	V	F	I	S	V	N	T	P	T	K	T	Y	G	M	G	K	G	R	A	A	D	L	K	Y	I	E	A	C	A	R	R	I	V	Q	N	S	N	G	Y	K	I	V	T	E	K	S	T	V	P	V	R	A	A	E	S	I	R	R	I	F	D	A	N	T	K	P	N	L	N	L	Q	V	L	S	N	P	E	F	L
Template Known Secondary structure											B		S	S	S	T	T	T	T	T	S	B		T													T			S									S	S			S												S			S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
							204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure		.	.	.	.	.																															.	.	.	.	.	.											.	.
Query SS confidence		.	.	.	.	.																															.	.	.	.	.	.											.	.
Query Sequence		.	.	.	.	.	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	.	.	.	.	.	.	G	A	R	L	H	R	I	S	A	V	.	.	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E
Query Conservation		.	.	.	.	.																															.	.	.	.	.	.											.	.
Alig confidence		.	.	.	.	.																															.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		A	E	G	T	A	I	K	D	L	K	N	P	D	R	V	L	I	G	G	D	E	T	P	E	G	Q	R	A	V	Q	A	L	C	A	V	Y	E	H	W	V	P	R	E	K	I	L	T	T	N	T	W	S	S	E	L	S	K	L	A	A	N	A	F	L	A	Q	R	I	S	S	I	N	S	I	S	A	L	C	E	A
Template Known Secondary structure			T	T	S							S		S								S	S																T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
			271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																						.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.															.
Query SS confidence		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.															.
Query Sequence		.	N	V	Q	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	A	M	V	G	R	L	F	A	Q	D	.	.	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	.	L	A	L	I	K	R	Y	Y	K	R	F
Query Conservation		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.															.
Alig confidence		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.															.
Template Conservation
Template Sequence		T	G	A	D	V	E	E	V	A	T	A	I	G	M	D	Q	R	I	G	N	K	F	L	K	A	S	V	G	F	G	G	S	C	F	Q	K	D	V	L	N	L	V	Y	L	C	E	A	L	N	L	P	E	V	A	R	Y	W	Q	Q	V	I	D	M	N	D	Y	Q	R	R	R	F	A	S	R	I	I	D	S	L
Template Known Secondary structure			T												T		T	T	T		S	S	S					S				S	S	S															T	T																														T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions