Job Description P07023 Confidence 99.56% Date Thu Jan 5 11:00:05 GMT 2012 Rank 38 Aligned Residues 242 % Identity 12% Template c3pduF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:3-hydroxyisobutyrate dehydrogenase family protein; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter sulfurreducens in complex with nadp+ Resolution 1.89 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	.	.	.	.	I	H	V	T	E	Q	V	I	G	K	L
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence								.																											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation								.
Template Sequence		T	Y	G	F	L	G	.	L	G	I	M	G	G	P	M	A	A	N	L	V	R	A	G	F	D	V	T	V	W	N	R	N	P	A	K	C	A	P	L	V	A	L	G	A	R	Q	A	S	S	P	A	E	V	C	A	A	C	D	I	T	I	A	M	L	A	D	P	A	A	A	R	E	V	C	F	G	A	N	G	V
Template Known Secondary structure								.		S	T	T											T	T								S	S	G	G	G	G							T					S	S									S							S	S										S	T	T
Template Predicted Secondary structure								.
Template SS confidence
		3	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		163	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																										.	.	.
Query SS confidence				.																										.	.	.
Query Sequence		P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	.	.	.	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H
Query Conservation				.																										.	.	.
Alig confidence				.																										.	.	.														.	.
Template Conservation																																														.	.
Template Sequence		L	E	G	I	G	G	G	R	G	Y	I	D	M	S	T	V	D	D	E	T	S	T	A	I	G	A	A	V	T	A	R	G	G	R	F	L	E	A	P	V	S	G	T	K	.	.	K	P	A	E	D	G	T	L	I	I	L	A	A	G	D	Q	S	L	F	T	D	A	G	P	A	F	A	A	L	G	K	K	C	L
Template Known Secondary structure							T	T							S																	T	T													.	.						T																T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.								270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.								300	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		R	I	S	A	V	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	.	.	.	.	.	.	.	E	N	V	Q	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L	F	A	Q	D	.	.	.	.	.	.	.	P	Q	L	Y	A
Query Conservation																																	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	G	E	V	G	Q	G	A	R	M	K	L	V	V	N	M	I	M	G	Q	M	M	T	A	L	G	E	G	M	A	L	G	R	N	C	G	L	D	G	G	Q	L	L	E	V	L	D	A	G	A	M	A	N	P	M	F	K	G	K	G	Q	M	L	L	S	G	E	F	P	T	S	F	P	L	K	H	M	Q	K
Template Known Secondary structure				S	S	T	T																														T	T													S	T	T															T					S	S	B
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.
Predicted Secondary structure														.	.	.																						.	.	.	.
Query SS confidence														.	.	.																						.	.	.	.
Query Sequence		D	I	I	M	S	S	E	R	N	L	A	L	.	.	.	I	K	R	Y	Y	K	R	F	G	E	A	I	E	L	L	E	Q	G	D	K	Q	.	.	.	.	A	F	I	D	S	F	R
Query Conservation														.	.	.																						.	.	.	.
Alig confidence														.	.	.																						.	.	.	.
Template Conservation
Template Sequence		D	L	R	L	A	V	E	L	G	D	R	L	G	Q	P	L	H	G	A	A	T	A	N	E	S	F	K	R	A	R	A	A	G	H	A	D	E	D	F	A	A	V	F	R	V	L	E
Template Known Secondary structure														T																			T	T		T	T	S	B	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions