 |
Job Description | P07023 | Confidence | 97.90% | Date | Thu Jan 5 11:00:05 GMT 2012 |
Rank | 211 | Aligned Residues | 100 |
% Identity | 17% | Template | c3oneA_ |
PDB info |
PDB header:hydrolase/hydrolase substrate | Chain: A: PDB Molecule:adenosylhomocysteinase; |
PDBTitle: crystal structure of lupinus luteus s-adenosyl-l-homocysteine2 hydrolase in complex with adenine
|
Resolution | 1.35 Å |
|
 |
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | R | P | V | V | I | V | G | G | G | G | Q | M | G | R | L | F | E | K | M | L | T | L | S | G | Y | Q | V | R | I | L | E | Q | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | W | D | R | A | A | D | I | V | A | D | A | G | M | V | I | V | S | V | P | I | H | V | T | E | Q | V | I | G | K | L | P | P |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
|
| . |
|
|   |
|
|   |
|
|
|   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |   | . |   |
|   |   |
Template Sequence |   |
A | G | K | V | A | V | V | A | G | . |
Y | G | D | V | G | K | G | C | A | A | A | L | K | Q | A | G | A | R | V | I | V | T | E | I | D | P | I | C | A | L | Q | A | T | M | E | G | L | Q | V | L | T | L | E | D | V | V | S | E | A | D | I | F | V | T | T | T | G | N | K | D | I | I | M | L | D | . |
H | M | K | K |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
| . |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
|  |  |  |  | T | T | T |
| S |  |  |  |  |
| S | S |
| S |
| S | B |
|  |  | . |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
261 | . | . | . | . | . | . | . | . | |
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | |
. | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | K | D | C | I | L | V | D | L | A | S | V | K | N | G | P | L | Q | A | M | L | V | A | H | . |
D | G | P | V | L | G | L | H | P |
Query Conservation |   |
|   |   |   |   |
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|   |
|   |
|   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | K | N | N | A | I | V | C | N | I | G | H | F | D | N | E | I | D | M | L | G | L | E | T | H | P | G | V | K | R | I | T | I | K | P |
Template Known Secondary structure |   |
S |
| T | T |  |  |  |  |  |
| S | S | S | G | G | G | B |
|  |  |  |  |  | T | S | T | T |
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
339 | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|