Job Description P07023 Confidence 98.65% Date Thu Jan 5 11:00:05 GMT 2012 Rank 135 Aligned Residues 162 % Identity 14% Template c3n7uD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:formate dehydrogenase; PDBTitle: nad-dependent formate dehydrogenase from higher-plant arabidopsis2 thaliana in complex with nad and azide Resolution 2.00 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.														.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Query Sequence		P	D	L	I	E	D	V	L	R	R	V	M	R	E	S	Y	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	D	K	G	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																					.																											.	.
Template Conservation																																																					.
Template Sequence		V	S	V	A	E	D	E	L	M	R	I	L	I	L	M	R	N	F	V	P	G	Y	N	Q	V	V	K	G	E	W	N	V	A	G	I	A	Y	R	A	Y	D	L	E	G	K	T	I	G	T	V	G	.	A	G	R	I	G	K	L	L	L	Q	R	L	K	P	F	G	C	N	L	L	Y	H	D	R	L	Q	M	A
Template Known Secondary structure																	T	T										T	T				T					T	T				S	T	T								.		S											G	G	G									S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
													133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																					.										.	.															.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																					.										.	.															.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	.	H	V	T	E	Q	V	I	G	K	.	.	L	P	P	L	P	K	D	C	I	L	V	D	L	A	.	.	.	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																					.										.	.															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.										.	.															.	.	.
Template Conservation
Template Sequence		P	E	L	E	K	E	T	G	A	K	F	V	E	D	L	N	E	M	L	P	K	C	D	V	I	V	I	N	M	P	L	T	E	K	T	R	G	M	F	N	K	E	L	I	G	K	L	K	K	G	V	L	I	V	N	N	A	R	G	A	I	M	E	R	Q	A	V	V	D	A	V	E	S	G	H	I	G	G	Y	S
Template Known Secondary structure									T					S	S					G	G	G		S						S				T	T	T	T	T		B							T	S		T	T							S		G	G	G	B												T	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		196	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		L	H	.	.	.	.	.	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.			.
Template Conservation											.
Template Sequence		G	D	V	W	D	P	Q	P	A	.	P	K	D	H	P	W	R	Y	M	P	N	Q	A	M	T	P	H	T	S	G	T	T	I	D	A	Q	L	R	Y	A	A
Template Known Secondary structure			S			S	S	S	S		.		T	T		G	G	G	T	S	T	T					S	S		G	G	G	S
Template Predicted Secondary structure											.
Template SS confidence
		307	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions