 |
Job Description | P07023 | Confidence | 97.71% | Date | Thu Jan 5 11:00:05 GMT 2012 |
Rank | 241 | Aligned Residues | 92 |
% Identity | 15% | Template | c3llvA_ |
PDB info |
PDB header:nad(p) binding protein | Chain: A: PDB Molecule:exopolyphosphatase-related protein; |
PDBTitle: the crystal structure of the nad(p)-binding domain of an2 exopolyphosphatase-related protein from archaeoglobus fulgidus to3 1.7a
|
Resolution | 1.70 Å |
|
 |
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | V | V | I | V | G | G | G | G | Q | M | G | R | L | F | E | K | M | L | T | L | S | G | Y | Q | V | R | I | L | E | Q | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | W | D | R | A | A | D | I | . |
V | A | D | A | G | M | V | I | V | S | V | P | I | H | V | T | E | Q |
Query Conservation |   |
  |   |
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   | . |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
| . |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |
|   |
Template Sequence |   |
Y | E | Y | I | V | I | G | . |
S | E | A | A | G | V | G | L | V | R | E | L | T | A | A | G | K | K | V | L | A | V | D | K | S | K | E | K | I | E | L | L | E | D | E | G | F | D | A | V | I | A | D | P | T | D | E | S | F | Y | R | S | L | D | L | E | G | V | S | A | V | L | I | T | G | S | D | D | E | F | N | L |
Template Known Secondary structure |   |
| S |  |  |  |  |
| . |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| T | T |
|  |  |  |  |  |  | S |
|
| T | T |
| S |  |  |  |  |
|
| S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
158 | . | 160 | . | . | . | . | |
. | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | G | K | L | P | P | . |
L | P | K | D | C | I | L | V | D | L | A | S | V | K | N | G | P | L | Q | A | M | L | V | A | H | D | G | P | V | L |
Query Conservation |   |
  |
|   |   |   |   |   | . |
|   |   |   |   |
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   | . | . | . |   |   |   |
|   |   |   |
|   |
|   |
|
Template Sequence |   |
K | I | L | K | A | L | R | S | V | S | D | V | Y | A | I | V | R | V | S | S | P | K | K | . |
. |
. |
K | E | E | F | E | E | A | G | A | N | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | S |
| G | G | G | . | . | . |  |  |  |  |  |  | T | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|