Job Description P07023 Confidence 97.67% Date Thu Jan 5 11:00:05 GMT 2012 Rank 244 Aligned Residues 106 % Identity 26% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query Sequence		R	A	E	A	E	A	L	G	V	P	P	D	L	I	E	D	V	L	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	R	E	S	Y	S	S	E	N	D	K	G	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	.	.	M	L	T	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.														.											.	.
Template Conservation																																													.	.	.	.	.	.	.														.
Template Sequence		K	Q	I	A	D	A	L	G	I	D	S	A	T	V	R	R	D	F	S	Y	F	G	E	L	G	R	R	G	F	G	Y	D	V	K	K	L	M	N	F	F	A	E	I	.	.	.	.	.	.	.	L	N	D	H	S	T	T	N	V	M	L	V	G	.	C	G	N	I	G	R	A	L	L	H	Y	R	F	H	D	R
Template Known Secondary structure									T	S											T	T				S	B	T	T	T	B														.	.	.	.	.	.	.	T	T		S	S									.		S								T	S		G	G	G	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.														.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		121	.	.	.	.	.		.	.	.	130	.	.																	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		S	G	Y	Q	V	R	.	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	.	.	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G	K	L	P	P	L	P	K	D	C	I	L
Query Conservation								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence								.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		N	K	M	Q	I	S	M	A	F	D	L	D	S	N	D	L	V	G	K	T	T	E	D	G	I	P	V	Y	G	I	S	T	I	N	D	H	L	I	D	S	D	I	E	T	A	I	L	T	V	P	S	T	E	A	Q	E	V	A	D	I	L	V	K	A	G	I	K	G	I	L
Template Known Secondary structure		S	S										T	T	S	T	T	T	T	S	B		T	T	S		B				G	G	G					T	S	S	S									S		G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions