Job Description P07023 Confidence 98.53% Date Thu Jan 5 11:00:05 GMT 2012 Rank 148 Aligned Residues 157 % Identity 19% Template c3k5pA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query Sequence		P	D	L	I	E	D	V	L	R	R	V	M	R	E	S	Y	S	S	E	N	D	.	.	.	.	.	.	.	.	.	.	.	K	G	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																		.																											.	.	.	.
Template Conservation																																																			.
Template Sequence		R	S	V	A	E	L	V	I	G	E	I	I	M	L	M	R	R	I	F	P	R	S	V	S	A	H	A	G	G	W	E	K	T	A	I	G	S	R	E	V	R	G	K	T	L	G	I	V	G	.	Y	G	N	I	G	S	Q	V	G	N	L	A	E	S	L	G	M	T	V	R	Y	Y	D	T	S	D	K	L	Q	Y
Template Known Secondary structure																	T	T										T	T							T	T				S	T	T								.		S													T	T								T	T					B
Template Predicted Secondary structure																																																			.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
							133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.																														.	.															.	.	.
Query SS confidence		.	.	.	.	.																														.	.															.	.	.
Query Sequence		.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G	K	.	.	L	P	P	L	P	K	D	C	I	L	V	D	L	A	.	.	.	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P
Query Conservation		.	.	.	.	.																														.	.															.	.	.
Alig confidence		.	.	.	.	.																				.	.	.	.							.	.															.	.	.																						.
Template Conservation																										.	.	.	.																																															.
Template Sequence		G	N	V	K	P	A	A	S	L	D	E	L	L	K	T	S	D	V	V	S	L	H	V	P	.	.	.	.	S	K	L	I	T	E	A	K	L	R	K	M	K	K	G	A	F	L	I	N	N	A	R	G	S	D	V	D	L	E	A	L	A	K	V	L	Q	E	G	H	L	A	G	A	A	I	.	D	V	F	P	V
Template Known Secondary structure		T	T	B				S	S									S								.	.	.	.				B								S		T	T							S		T	T	S	B											T	T	S							.				S	S
Template Predicted Secondary structure																										.	.	.	.																																															.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.
		203	.	.										.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure					.	.	.	.	.	.	.	.	.												.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.												.	.	.
Query Sequence		D	S	G	.	.	.	.	.	.	.	.	.	S	L	A	K	Q	V	V	V	W	C	D	.	.	.	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I
Query Conservation					.	.	.	.	.	.	.	.	.												.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation
Template Sequence		E	P	A	S	N	G	E	R	F	S	T	P	L	Q	G	L	E	N	V	I	L	T	P	H	I	G	G	S	T	E	E	A	Q	E	R	I	G	T	E	V
Template Known Secondary structure				S	S	T	T	S					T	T	T	T		T	T						S		T	T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions