Job Description P07023 Confidence 97.03% Date Thu Jan 5 11:00:05 GMT 2012 Rank 402 Aligned Residues 101 % Identity 18% Template c3hn7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution Resolution 1.65 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	.	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	W	D	R	A	A	D	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I
Query Conservation																		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.								.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		G	X	H	I	H	I	L	G	.	I	C	G	T	F	X	G	S	L	A	L	L	A	R	A	L	G	H	T	V	T	G	S	D	A	N	I	Y	P	P	X	S	T	Q	L	E	Q	A	G	V	T	I	E	E	G	Y	L	I	A	H	L	Q	P	A	P	D	L	V	V	V	G	N	A	X	K	R	G	X	D	V	I
Template Known Secondary structure									T	.	T	T	S													T	T								S				T	T								T	T						S			G	G	G	G		S			S						T	T			T	T	S
Template Predicted Secondary structure										.
Template SS confidence
		0	.	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		160	.															.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.				.															.	.	.	.	.															.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.				.															.	.	.	.	.															.	.	.
Query Sequence		G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	.	.	.	.	.	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	.	.	.	V	L	G	L	H	P	M
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.				.															.	.	.	.	.															.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.				.															.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		E	Y	X	L	D	T	G	L	R	Y	T	S	G	P	Q	F	L	S	E	Q	V	L	Q	S	R	H	V	I	A	V	A	G	T	H	G	K	T	T	T	T	T	X	L	A	W	I	L	H	Y	A	G	I	D	A	G	F	L	I	G	G	V	P	L
Template Known Secondary structure								T														T	G	G	G	S								S	S																T	T								S			B
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions