 |
Job Description | P07023 | Confidence | 97.23% | Date | Thu Jan 5 11:00:05 GMT 2012 |
Rank | 354 | Aligned Residues | 98 |
% Identity | 14% | Template | c3f4lF_ |
PDB info |
PDB header:oxidoreductase | Chain: F: PDB Molecule:putative oxidoreductase yhhx; |
PDBTitle: crystal structure of a probable oxidoreductase yhhx in2 triclinic form. northeast structural genomics target er647
|
Resolution | 2.00 Å |
|
 |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
. | . | . | . | . | 120 | . | . | . | |
|
. | . | . | . | . | . | 130 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | |
|
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | V | I | V | G | G | G | G | Q | M | G | R | L | F | . |
E | K | M | L | T | L | S | G | Y | . |
. |
Q | V | R | I | L | E | Q | H | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | D | R | A | A | D | I | V | A | D | . |
. |
A | G | M | V | I | V | S | V | P | I | H | V | T | E | Q | V | I |
Query Conservation |   |
  |
|   |
|
|
|
|   |
|   |
|
|   |   |   | . |
|   |   |
|   |   |   |
|   | . | . |   |
|   |
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   | . | . |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
| . |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
N | C | A | F | I | G | . |
F | G | K | S | T | T | R | Y | H | L | P | Y | V | L | N | R | K | D | S | W | H | V | A | H | I | F | R | R | H | A | K | P | E | E | Q | A | P | I | Y | S | H | I | H | F | T | S | D | L | D | E | V | L | N | D | P | D | V | K | L | V | V | V | C | T | H | A | D | S | H | F | E | Y | A |
Template Known Secondary structure |   |
 |  |  |  |  |
| . |
| S |  |  |  |  |  |  | T |  |  |  |  | T | T |
| T | T | T |  |  |  |  |  |  |  |
| S | S |
|
| T | T | S | S | S | G | G | G | T | T |
|  |  |  | S |
|  |  |  |  |  | T |
| T | T |  |  |  |  |  |  |
| S |
| G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
|
|
|
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | L | P | P | L | P | K | D | C | I | L | V | D | . |
. |
. |
. |
L | A | S | V | K | N | G | P | L | Q | A | M | L | V | A | H | D | G | P | V | L | G | L | H | P | M |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|
|   |
| . | . | . | . |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
| . |
|
|   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
K | R | A | L | E | A | G | K | . |
N | V | L | V | E | K | P | F | T | P | T | L | A | Q | A | K | E | L | F | A | L | A | K | S | K | G | L | T | V | T | P | Y | Q | N | R |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
| . |  |  |  |  |
| S |
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
|
| G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . |
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|