Job Description P07023 Confidence 97.84% Date Thu Jan 5 11:00:05 GMT 2012 Rank 216 Aligned Residues 172 % Identity 14% Template c3f46A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methenyltetrahydromethanopterin hydrogenase; PDBTitle: the crystal structure of c176a mutated [fe]-hydrogenase (hmd)2 holoenzyme from methanocaldococcus jannaschii Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																						.									.
Query SS confidence																						.									.
Query Sequence		A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	.	Q	V	I	G	K	L	P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W
Query Conservation																						.									.
Alig confidence																						.									.
Template Conservation
Template Sequence		R	E	A	V	E	G	A	D	I	V	I	T	W	L	P	K	G	N	K	Q	P	D	I	I	K	K	F	A	D	A	I	P	E	G	A	I	V	T	H	A	A	T	I	P	T	T	K	F	A	K	I	F	K	D	L	G	R	E	D	L	N	I	T	S	Y	H	P	G	C	V	P	E	M	K	G	Q	V	Y	I	A
Template Known Secondary structure						T	T		S								S	S	S								T	T	G	G	G	S		T	T							T	T	S												T	T		T	T	S						B		S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H	R	I	S	A	V	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E	N	V	Q	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R
Query Conservation
Alig confidence																													.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Template Conservation																													.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Template Sequence		E	G	Y	A	S	E	E	A	V	N	K	L	Y	E	I	G	K	I	A	R	G	K	A	F	K	M	P	.	.	.	.	A	N	L	I	G	P	V	C	D	M	C	S	A	V	T	A	T	V	Y	A	G	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	D	A	.	.	.	V	T	K
Template Known Secondary structure			S	S	S																	S							.	.	.	.									S	T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Template Predicted Secondary structure																													.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.																.	.	.	270				.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	Q	D	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	L	A	L	I	K	R	Y	Y	K	R	F	G	E	A	I	E	L	L	E	Q	G	D	K	Q	A	F	I	D	S	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	G	A	P	A	D	F	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	A	D	E	A	L	T	Q	I	H	N	L	M	K	E	K	G	I	A	N	M	E	E	A	L
Template Known Secondary structure		T	S									.	.	.	.	.	.	.	.	.	.	.	.	.																			G	G	G	G	G	G	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.														.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions