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Job DescriptionP07023
Confidence100.00%DateThu Jan 5 11:00:05 GMT 2012
Rank7Aligned Residues253
% Identity19%Templatec3dzbA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus
Resolution2.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RPVVIVGGGGQMGRLFEKMLTLSGY. . QVRILEQHD. . . . . . . . . . . . . . . WDRAADIVADAGMVIVSVPIHVTEQVIGK
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Template Sequence  KTIYIAG. LGLIGGSLALGIKRDHPDYEILGYNRSDYSRNIALERGIVDRATGDFKEFAPLADVIILAVPIKQTXAYLKE
Template Known Secondary structure 
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STT
TTS
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T
S
SS
GGG
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S
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Query Sequence  LPP. . LPKDCILVDLASVKNGPLQAMLVAH. . . DGPVLGLHPMFGPDS. . GSLAKQVVVWCDGRK. . PEAYQWFLEQIQV
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Template Sequence  LADLDLKDNVIITDAGSTKREIVEAAERYLTGKNVQFVGSHPXAGSAADVTLFENAYYIFTPTSLTKETTIPELKDILSG
Template Known Secondary structure  TTS


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TTSS


B




TTTTTTS

TT

TTGGG
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
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Query Sequence  WGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSER
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Template Sequence  LKSRYVEIDAAEHDRVTSQISHFPHLLASGLXEQAADYAQAHEXTNHFAAGGFRD. . . . XTRIAESEPGXWASILXTNGP
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T
T

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   169170.........180.........190.........200.........210.........220... ......230.........240....
 
   313 ......320.........330.........340.........350......
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Query Sequence  N. LALIKRYYKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQR
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Template Sequence  AVLDRIEDFKKRLDHVADLIKAEDESAIWEFFDNGRKKRKEXEIH
Template Known Secondary structure  TT
TTGG
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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