Job Description P07023 Confidence 99.44% Date Thu Jan 5 11:00:05 GMT 2012 Rank 57 Aligned Residues 240 % Identity 15% Template c3dojA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase-like protein; PDBTitle: structure of glyoxylate reductase 1 from arabidopsis2 (atglyr1) Resolution 2.10 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.														.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query Sequence		P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G	K	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Alig confidence								.																											.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation								.
Template Sequence		E	V	G	F	L	G	.	L	G	I	M	G	K	A	M	S	M	N	L	L	K	N	G	F	K	V	T	V	W	N	R	T	L	S	K	C	D	E	L	V	E	H	G	A	S	V	C	E	S	P	A	E	V	I	K	K	C	K	Y	T	I	A	M	L	S	D	P	C	A	A	L	S	V	V	F	D	K	G	G	V
Template Known Secondary structure								.		S													T	T								S	S	G	G	G	G						T	T					S	S									S							S	S										S	T	T		G
Template Predicted Secondary structure								.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		L	P	P	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	.	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H	R	I
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		L	E	Q	I	C	E	G	K	G	Y	I	D	M	S	T	V	D	A	E	T	S	L	K	I	N	E	A	I	T	G	K	G	G	R	F	V	E	G	P	V	S	G	S	K	K	P	A	E	D	G	Q	L	I	I	L	A	A	G	D	K	A	L	F	E	E	S	I	P	A	F	D	V	L	G	K	R	S	F	Y	L
Template Known Secondary structure		G	G	G			T	T							S																	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		S	A	V	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	.	.	.	.	L	H	L	A	E	E	N	V	Q	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L	F	A	Q	D	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	L	A	L
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.
Template Sequence		G	Q	V	G	N	G	A	K	M	K	L	I	V	N	M	I	M	G	S	M	M	N	A	F	S	E	G	L	V	L	A	D	K	S	G	L	S	S	D	T	L	L	D	I	L	D	L	G	A	M	T	N	P	M	F	.	.	.	.	.	.	.	.	K	G	K	G	P	S	M	N	K	S	S	Y	P	P	A	F	P
Template Known Secondary structure		S	S	T	T																														T	T	S												S	T	T						.	.	.	.	.	.	.	.									T	T					S	S	B
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.									.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.						.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		I	K	R	Y	Y	K	R	F	G	E	A	I	E	L	L	E	Q	G	D	.	.	.	.	.	K	Q	A	F	I	D	S	F	R	K	V	E	H
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.
Template Conservation
Template Sequence		L	K	H	Q	Q	K	D	M	R	L	A	L	A	L	G	D	E	N	A	V	S	M	P	V	A	A	A	A	N	E	A	F	K	K	A	R	S
Template Known Secondary structure																			T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions