Return to main results Retrieve Phyre Job Id

Job DescriptionP07023
Confidence98.77%DateThu Jan 5 11:00:05 GMT 2012
Rank116Aligned Residues72
% Identity28%Templatec3c7cB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:octopine dehydrogenase; PDBTitle: a structural basis for substrate and stereo selectivity in2 octopine dehydrogenase (odh-nadh-l-arginine)
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120. ........130.. .......140..
Predicted Secondary structure 



.




....................................

Query SS confidence 





















.










. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .









Query Sequence  PVVIVGGGGQMGRLFEKMLTLS. GYQVRILEQHD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WDRAADIVAD
Query Conservation   
 



 
 

   
  
   .
  
 
 
   ....................................          
Alig confidence 





.














.










....................................









Template Conservation 

 


.


 
 


  

   
  
 
                                        

 
  


  
Template Sequence  KVCVCG. GGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG
Template Known Secondary structure 
.
STTSTT

STTTTS

TTS


SS
TT
Template Predicted Secondary structure 
.



































Template SS confidence 















































































   4..... 10.........20.........30.........40.........50.........60.........70.........80..
 
   143......150.........160.... .....170..
Predicted Secondary structure 




.




Query SS confidence 





















.







Query Sequence  AGMVIVSVPIHVTEQVIGKLPP. LPKDCILV
Query Conservation 









      
     .
    

 
Alig confidence 





















.







Template Conservation 





 


     

  


 
    


Template Sequence  ADVVILTVPAFAHEGYFQAMAPYVQDSALIV
Template Known Secondary structure 
S
S
GGGTTT

TT
Template Predicted Secondary structure 









Template SS confidence 






























   83......90.........100.........110...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions