Job Description P07023 Confidence 99.76% Date Thu Jan 5 11:00:05 GMT 2012 Rank 22 Aligned Residues 234 % Identity 15% Template c3c24A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (yp_511008.1) from2 jannaschia sp. ccs1 at 1.62 a resolution Resolution 1.62 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	.	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	D	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I
Query Conservation																				.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.					.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		K	N	D	V	G	P	K	T	V	A	I	L	G	.	A	G	G	K	X	G	A	R	I	T	R	K	I	H	D	S	A	H	H	L	A	A	I	E	I	A	P	E	G	R	D	R	L	Q	G	X	G	I	P	L	T	D	G	D	G	W	I	D	E	A	D	V	V	V	L	A	L	P	D	N	I	I	E	K	V	A
Template Known Secondary structure				S										T	.	T	T	S													S	S	S								S										T	T						S	S	G	G	G	G	T		S						S
Template Predicted Secondary structure															.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.														200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.
Predicted Secondary structure							.																											.										.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence							.																											.										.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		G	K	L	P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	.	G	P	V	L	G	L	H	P	M	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	.	.	.	.	.	K
Query Conservation							.																											.										.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence							.													.	.													.										.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																				.	.
Template Sequence		E	D	I	V	P	R	V	R	P	G	T	I	V	L	I	L	D	A	.	.	A	A	P	Y	A	G	V	X	P	E	R	A	D	I	T	Y	F	I	G	H	P	C	H	P	P	L	F	N	D	E	T	D	P	A	A	R	T	D	Y	H	G	G	I	A	K	Q	A	I	V	C	A	L	X	Q	G	P	E	E	H	Y
Template Known Secondary structure					G	G	G	S		T	T						S		S	.	.						T		S				T	T	S										S		S	S					S					T		S	S	S	S	S	S											S		T
Template Predicted Secondary structure																				.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H	R	I	S	A	V	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E	.	.	.	.	N	V	Q	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L
Query Conservation																																																					.	.	.	.
Alig confidence																																																					.	.	.	.																			.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		A	I	G	A	D	I	C	E	T	X	W	S	P	V	T	R	T	H	R	V	T	T	E	Q	L	A	I	L	E	P	G	L	S	E	X	V	A	X	P	F	V	E	T	X	V	H	A	V	D	E	C	A	D	R	Y	G	I	D	R	Q	A	A	L	D	F	X	I	G	H	L	N	V	E	.	.	.	I	A	X	W
Template Known Secondary structure												T		S																T	T					T	T																																						.	.	.
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.						.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		F	A	Q	D	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	L	A	L	I	K	R	Y	Y	K	.	.	.	.	.	R	F	G	E	A	I	E	L	L	E
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.
Template Conservation
Template Sequence		F	G	Y	S	P	K	V	A	A	L	R	L	X	E	F	A	K	D	I	V	V	K	E	D	W	R	E	A	L	N	P	A	K	V	K	Q	A	A	E	L	I	A
Template Known Secondary structure		T	T	S	S						S	T	T									S		T	T	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions