Job Description P07023 Confidence 97.62% Date Thu Jan 5 11:00:05 GMT 2012 Rank 262 Aligned Residues 128 % Identity 19% Template c2yyyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase Resolution 1.85 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.																																			.	.	.	.	.	.	.	140	.
Predicted Secondary structure																											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	.	.	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A
Query Conservation																											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		P	A	K	V	L	I	N	G	.	Y	G	S	I	G	K	R	V	A	D	A	V	S	M	Q	D	D	M	E	V	I	G	V	T	K	T	K	P	D	F	E	A	R	L	A	V	E	K	G	Y	K	L	F	V	A	I	P	D	N	E	R	V	K	L	F	E	D	A	G	I	P	V	E	G	T	I	L	D	I	I	E
Template Known Secondary structure										.		S													S	S	S									S	S		S									T	T						S	S													T						B	G	G	G	T	G	G
Template Predicted Secondary structure										.
Template SS confidence
		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G	K	L	P	P	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	.	.	L	A	K	Q	V	V	V	W	C	D	G	R	K
Query Conservation																																																																			.	.
Alig confidence																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	D	I	V	V	D	G	A	P	K	K	I	G	K	Q	N	L	E	N	I	.	.	Y	K	P	H	K	V	K	A	I	L	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	A	K	D	V	E	D	N	F	N	A	L	W	S	Y	N	R	C	Y	G	K	D	Y	V	R	V	V	S	C	N
Template Known Secondary structure		G		S								T	T									T	.	.	T	T	T	T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		G	G	G	S	S					T	T	T	T	T	T	T	T	T	T		S
Template Predicted Secondary structure																							.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.														.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		P	E	A	Y	Q	W	F	L	E	Q	I	.	Q	V	W	G	A	R	L	H	R	I	S
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		T	T	G	L	C	R	I	L	Y	A	I	N	S	I	A	D	I	K	K	A	R	I	V
Template Known Secondary structure														T	T	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions