Job Description P07023 Confidence 99.48% Date Thu Jan 5 11:00:05 GMT 2012 Rank 52 Aligned Residues 224 % Identity 15% Template c2y0dB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: bcec mutation y10k Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																																		.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		N	L	T	I	I	G	.	S	G	K	V	G	L	V	T	G	A	C	L	A	D	I	G	H	D	V	F	C	L	D	V	D	Q	A	K	I	D	I	L	N	N	G	G	V	P	I	H	E	P	G	L	K	E	V	I	A	R	N	R	S	A	G	R	L	R	F	S	T	D	I	E	A	A	V	A	H	G	D	V	Q
Template Known Secondary structure								.		S												T	T	T								S									T	T	T			S	S			T	T											T	T	S															S
Template Predicted Secondary structure								.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		147	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.										.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.													.																													.	.	.	.	.	.	.	.	.							.	.	.
Query SS confidence								.	.	.	.	.													.																													.	.	.	.	.	.	.	.	.							.	.	.
Query Sequence		I	V	S	V	P	I	.	.	.	.	.	H	V	T	E	Q	V	I	G	K	L	P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	.	.	.	.	.	.	.	.	.	V	L	G	L	H	P	.	.	.	M	F	G	P	D	S	G	S	L	A
Query Conservation								.	.	.	.	.													.																													.	.	.	.	.	.	.	.	.							.	.	.
Alig confidence								.	.	.	.	.													.																													.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation
Template Sequence		F	I	A	V	G	T	P	S	A	D	L	Q	Y	V	L	A	A	A	R	N	I	G	R	Y	M	T	G	F	K	V	I	V	D	K	S	T	V	P	V	G	T	A	E	R	V	R	A	A	V	A	E	E	L	A	K	R	G	G	Q	M	F	S	V	V	S	N	P	E	F	L	K	E	G	A	A	V	D	D	F	T
Template Known Secondary structure																												S								S				T	T															T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.											.	.																												.
Query SS confidence																											.	.	.	.	.	.	.											.	.																												.
Query Sequence		K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	.	.	.	.	.	.	.	G	A	R	L	H	R	I	S	A	V	.	.	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E	.	N	V	Q	L	E	Q	L	L
Query Conservation																											.	.	.	.	.	.	.											.	.																												.
Alig confidence																											.	.	.	.	.	.	.											.	.																												.
Template Conservation
Template Sequence		R	P	D	R	I	V	I	G	C	D	D	D	V	P	G	E	R	A	R	E	L	M	K	K	L	Y	A	P	F	N	R	N	H	E	R	T	L	Y	M	D	V	R	S	A	E	F	T	K	Y	A	A	N	A	M	L	A	T	R	I	S	F	M	N	E	L	A	N	L	A	D	R	F	G	A	D	I	E	A	V	R
Template Known Secondary structure		S		S								S	S															G	G	G		S	S	S																																								T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		279																			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																.
Query Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L	F	A	Q	.	.	.	D	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	.	L	A	L	I	K	R	Y	Y	K	R	F
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																.
Template Conservation
Template Sequence		R	G	I	G	S	D	P	R	I	G	Y	H	F	L	Y	A	G	C	G	Y	G	G	S	C	F	P	K	D	V	E	A	L	I	R	T	A	D	E	H	G	Q	S	L	Q	I	L	K	A	V	S	S	V	N	A	T	Q	K	R	V	L	A	D	K	I	V	A	R	F
Template Known Secondary structure						T	S	T	T	T		S	S	S				S	S				S	S	S															T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions