Job Description P07023 Confidence 99.21% Date Thu Jan 5 11:00:05 GMT 2012 Rank 82 Aligned Residues 213 % Identity 18% Template c2wtbA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:fatty acid multifunctional protein (atmfp2); PDBTitle: arabidopsis thaliana multifuctional protein, mfp2 Resolution 2.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		L	A	K	R	L	E	L	V	A	E	V	G	E	V	K	S	R	F	G	L	P	I	Y	V	P	E	R	E	A	S	M	L	A	S	R	R	A	E	A	E	A	L	G	V	P	P	D	L	I	E	.	.	.	.	.	.	.	D	V	L	R	R	V	M	R	E	S	Y	S	S	E	N	D	K	G	F	K	T	L	C
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	E	A	R	E	I	L	T	F	A	K	A	Q	T	L	K	R	A	P	N	M	K	H	P	L	M	C	L	D	A	I	E	V	G	I	V	S	G	P	R	A	G	L	E	K	E	A	E	V	A	S	Q	V	V	K	L	D	T	T	K	G	L	I	H	V	F	F	S	Q	R	G	T	A	K	V	P	G	V	T
Template Known Secondary structure																					T	T																	S																	T	T																G	G	G			T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
								96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																																	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A
Query Conservation		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.											.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		D	R	G	L	V	P	R	K	I	K	K	V	A	I	I	G	.	G	G	L	M	G	S	G	I	A	T	A	L	I	L	S	N	Y	P	V	I	L	K	E	V	N	E	K	F	L	E	A	G	I	G	R	V	K	A	N	L	Q	S	R	V	R	S	Q	E	K	F	E	K	T	M	S	L	L	K	G	S	L	D	Y
Template Known Secondary structure		S	S															.		S												T	T	T								S	S																		T	T			T	T					T	T	T	S					S	S	S
Template Predicted Secondary structure																		.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																.	.														.																										.	.
Query SS confidence																.	.														.																										.	.
Query Sequence		D	I	V	A	D	A	G	M	V	I	V	S	V	P	.	.	I	H	V	T	E	Q	V	I	G	K	L	P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	.	.	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V
Query Conservation																.	.														.																										.	.
Alig confidence																.	.														.													.	.												.	.																			.	.
Template Conservation																																												.	.																																.	.
Template Sequence		E	S	F	R	D	V	D	M	V	I	E	A	V	I	E	N	I	S	L	K	Q	Q	I	F	A	D	L	E	K	Y	C	P	Q	H	C	I	L	A	S	N	T	S	.	.	T	I	D	L	N	K	I	G	E	R	T	K	S	Q	D	R	I	V	G	A	H	F	F	S	P	A	H	I	M	P	L	.	.	L	E	I
Template Known Secondary structure		G	G	G	T	T		S								S																S		T	T								S	.	.	S	S						T	T	T		S		T	T	T								S	S	T	T	T				.	.
Template Predicted Secondary structure																																												.	.																																.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.			460	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	T	N	H	T	S	A	Q	V	I	V	D	L	L	D	V	G	K	K	I	K	K	T	P	V	V	V
Template Known Secondary structure					S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions