Job Description P07023 Confidence 99.39% Date Thu Jan 5 11:00:05 GMT 2012 Rank 60 Aligned Residues 209 % Identity 17% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	.	.	.	.	.	.	.	.	.	.	D	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G	K	L	P	P	L	P	K	D	C	I
Query Conservation																																	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																	.	.	.	.						.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation							.																	.	.	.	.																																																	.	.
Template Sequence		L	N	F	V	G	.	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	A	E	V	Y	G	G	K	A	A	T	L	E	K	H	P	E	V	V	F	V	I	V	P	D	R	Y	I	K	T	V	A	N	H	L	N	L	.	.	G	D	A	V
Template Known Secondary structure							.		S	T	T													.	.	.	.	B			S	S									T	T	T	T					T	T											S										T	T	T			.	.	S	S
Template Predicted Secondary structure							.																	.	.	.	.																																																	.	.
Template SS confidence
		3	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H	R	I	S	A	V	E	H	D	Q	N	M	A
Query Conservation
Alig confidence										.	.																																			.	.
Template Conservation										.	.																																			.	.
Template Sequence		L	V	H	C	S	G	F	L	.	.	S	S	E	I	F	K	K	S	G	R	A	S	I	H	P	N	F	S	F	L	E	K	A	L	E	X	K	D	Q	I	V	F	G	L	.	.	E	G	D	E	R	G	L	P	I	V	K	K	I	A	E	E	I	S	G	K	Y	F	V	I	E	K	K	K	A	Y	H	L	A	A
Template Known Secondary structure							S	S	S	.	.		S	T	T	T		S	S	S								S				T	T	G	G	G		G	G	G						.	.				T	T													S	S
Template Predicted Secondary structure										.	.																																			.	.
Template SS confidence
		83	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		251	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.																				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	Q	A	.	.	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E	N	V	Q	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L	F	A	Q	D	P	Q	L	Y	A	D	I	I	M	S
Query Conservation						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																	.																																																				.	.	.	.	.	.	.	.
Template Sequence		V	I	A	S	N	F	P	V	A	L	A	Y	L	S	K	.	R	I	Y	T	L	L	G	L	D	E	P	E	L	L	I	H	T	L	X	K	G	V	A	D	N	I	K	K	X	R	V	E	C	S	L	T	G	P	V	K	R	G	D	W	Q	V	V	E	E	E	R	.	.	.	.	.	.	.	.	R	E	Y	E	K
Template Known Secondary structure						T											.						T	T		S																				S								S															.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																																				.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.									.	230	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	R	N	L	A	L	I	K	R	Y	Y	K	R	F	G	E	A	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	G	N	T	V	L	Y	D	E	I	V	K	L	L	R	E	V	A	E
Template Known Secondary structure			S	S		S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions