Job Description P07023 Confidence 100.00% Date Thu Jan 5 11:00:05 GMT 2012 Rank 5 Aligned Residues 250 % Identity 20% Template c2f1kD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase Resolution 1.55 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.															.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Query Sequence		P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G	K	L	P	P	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Alig confidence								.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation								.
Template Sequence		K	I	G	V	V	G	.	L	G	L	I	G	A	S	L	A	G	D	L	R	R	R	G	H	Y	L	I	G	V	S	R	Q	Q	S	T	C	E	K	A	V	E	R	Q	L	V	D	E	A	G	Q	D	L	S	L	L	Q	T	A	K	I	I	F	L	C	T	P	I	Q	L	I	L	P	T	L	E	K	L	I	P	H
Template Known Secondary structure								.		S													T	T								S											T	T	S		S				S		G	G	G	G	T	T		S						S		G	G	G									G	G	G
Template Predicted Secondary structure								.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.														.
Query SS confidence																																												.	.	.	.	.	.	.														.
Query Sequence		L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	.	.	.	.	.	.	.	L	A	K	Q	V	V	V	W	C	D	G	R	K	.	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R
Query Conservation																																												.	.	.	.	.	.	.														.
Alig confidence																												.																.	.	.	.	.	.	.														.
Template Conservation																												.
Template Sequence		L	S	P	T	A	I	V	T	D	V	A	S	V	K	T	A	I	A	E	P	A	S	Q	L	W	S	.	G	F	I	G	G	H	P	A	G	T	A	A	Q	G	I	D	G	A	E	E	N	L	F	V	N	A	P	Y	V	L	T	P	T	E	Y	T	D	P	E	Q	L	A	L	R	S	V	L	E	P	L	G	V	K
Template Known Secondary structure		S		T	T								S			T	T	T									T	.	T										S			S	G	G	G			S	S	T	T	T	T									T	T													G	G	G	T
Template Predicted Secondary structure																												.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																							.	.																																									.
Query SS confidence																																							.	.																																									.
Query Sequence		L	H	R	I	S	A	V	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E	N	V	Q	.	.	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L	F	A	Q	D	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	.
Query Conservation																																							.	.																																									.
Alig confidence																																							.	.															.	.	.	.																							.
Template Conservation																																																							.	.	.	.
Template Sequence		I	Y	L	C	T	P	A	D	H	D	Q	A	V	A	W	I	S	H	L	P	V	M	V	S	A	A	L	I	Q	A	C	A	G	E	K	D	G	D	I	L	K	L	A	Q	N	L	A	S	S	G	F	R	D	.	.	.	.	T	S	R	V	G	G	G	N	P	E	L	G	T	M	M	A	T	Y	N	Q	R	A	L
Template Known Secondary structure																		T																T		S																			.	.	.	.			T	G	G	G	S												T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	I	K	R	Y	Y	K	R	F	G	E	A	I	E	L	L	E	Q	G	D	K	Q	A	F	I	D	S	F	R	K	V	E	H	W	F	G	D	Y	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	S	L	Q	D	Y	R	Q	H	L	D	Q	L	I	T	L	I	S	N	Q	Q	W	P	E	L	H	R	L	L	Q	Q	T	N	G	D	R	D	K	Y	V	E
Template Known Secondary structure																					T	T																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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