Job Description P07023 Confidence 97.42% Date Thu Jan 5 11:00:05 GMT 2012 Rank 301 Aligned Residues 146 % Identity 14% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		S	Y	S	S	E	N	D	K	G	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	.	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G
Query Conservation																																		.
Alig confidence																										.								.																			.																										.	.	.
Template Conservation																										.																											.																										.	.	.
Template Sequence		T	Q	Q	L	A	K	L	R	S	I	V	P	E	X	R	R	V	R	H	I	H	F	V	G	.	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	.	P	N	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	N	H	R	P	E	N	V	R	.	.	.
Template Known Secondary structure									T	T	T	S				T	T								T	.	T	T	S	T	T											T	T								S	S	.											T	T					S	S			G	G	G	G	T	.	.	.
Template Predicted Secondary structure																										.																											.																										.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		K	L	P	P	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	.	.	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H
Query Conservation																																																													.	.
Alig confidence		.	.	.	.	.																																					.	.	.																.	.
Template Conservation		.	.	.	.	.																																					.	.	.
Template Sequence		.	.	.	.	.	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	.	.	.	E	L	X	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y	A	E	A	G	L	D	P	T
Template Known Secondary structure		.	.	.	.	.	T		S						T	T			T	T										T	T												.	.	.				T	T	S							S	S	S																T	T
Template Predicted Secondary structure		.	.	.	.	.																																					.	.	.
Template SS confidence
							78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		239	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions