Job Description P07023 Confidence 99.66% Date Thu Jan 5 11:00:05 GMT 2012 Rank 26 Aligned Residues 254 % Identity 16% Template c2ep9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase; PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form) Resolution 1.85 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																																							.	.	.	.	.	140	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	A	D	I	V	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		D	V	L	I	V	G	.	S	G	L	V	G	R	S	W	A	M	L	F	A	S	G	G	F	R	V	K	L	Y	D	I	E	P	R	Q	I	T	G	A	L	E	N	I	R	K	E	M	K	S	L	Q	Q	S	G	S	L	K	G	S	L	S	A	E	E	Q	L	S	L	I	S	S	C	T	N	L	A	E	A	V	E
Template Known Secondary structure								.		S													T	T								S																						T	T				S	S	S								T					S						T	T
Template Predicted Secondary structure								.
Template SS confidence
		8	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.														.
Query SS confidence												.	.														.
Query Sequence		D	A	G	M	V	I	V	S	V	P	.	.	I	H	V	T	E	Q	V	I	G	K	L	P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R
Query Conservation												.	.														.
Alig confidence												.	.														.																																												.	.
Template Conservation																																																																							.	.
Template Sequence		G	V	V	H	I	Q	E	C	V	P	E	N	L	D	L	K	R	K	I	F	A	Q	L	D	S	I	V	D	D	R	V	V	L	S	S	S	S	S	C	L	L	P	S	K	L	F	T	G	L	A	H	V	K	Q	C	I	V	A	H	P	V	N	P	P	Y	Y	I	P	L	.	.	V	E	L	V	P	H	P	E	T
Template Known Secondary structure		T		S								S														T	T			S	S								S	S								T	T		T	T	G	G	G								S	S	T	T	T				.	.							T	T
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H	R	I	S	A	V	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E	N	V	Q	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L	F	A	Q
Query Conservation
Alig confidence																																															.	.	.																						.	.	.	.	.	.
Template Conservation																																															.	.	.																						.	.	.	.	.	.
Template Sequence		S	P	A	T	V	D	R	T	H	A	L	M	R	K	I	G	Q	S	P	V	R	V	L	K	E	I	D	G	F	V	L	N	R	L	Q	Y	A	I	I	S	E	A	W	R	L	.	.	.	V	E	E	G	I	V	S	P	S	D	L	D	L	V	M	S	D	G	L	G	M	.	.	.	.	.	.	R	Y	A	F	I
Template Known Secondary structure																T	T							S	S			T	T	T	T																.	.	.			T	T	S	S											T	T				.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																																															.	.	.																						.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		D	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	L	A	L	I	K	R	Y	Y	K	R	F	G	E	A	I	E	L	L	E	Q	G	D	K	.	.	Q	A	F	I	D	S	F	R	K	V	E	H	W	F	G	D	Y	A	Q	R	F	Q	S	E	S	R	V	L	L	R	Q
Query Conservation																																								.	.
Alig confidence																.	.																							.	.
Template Conservation																.	.
Template Sequence		G	P	L	E	T	M	H	L	N	A	E	G	M	L	.	.	S	Y	S	D	R	Y	S	E	G	M	K	R	V	L	K	S	F	G	S	I	P	E	F	S	G	A	T	V	E	K	V	N	Q	A	M	C	K	K	V	P	A	D	P	E	H	L	A	A	R	R	E	W	R	D	E
Template Known Secondary structure										T	T	T	S			.	.																T																							S		S	S
Template Predicted Secondary structure																.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions