 |
Job Description | P07023 | Confidence | 97.35% | Date | Thu Jan 5 11:00:05 GMT 2012 |
Rank | 329 | Aligned Residues | 98 |
% Identity | 12% | Template | c2dwcB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl |
PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp
|
Resolution | 1.70 Å |
|
 |
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | K | G | F | K | T | L | C | P | S | L | R | P | V | V | I | V | G | G | G | G | Q | M | G | R | L | F | E | K | M | L | T | L | S | G | Y | Q | V | R | I | L | E | Q | H | D | W | D | R | A | A | D | I | V | A | D | A | G | M | V | I | V | S | V | P | I | H | V | T | E | Q | V | I | G | K | L | P | P | L | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
| . |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
R | D | E | L | G | T | A | T | T | D | S | A | Q | K | I | L | L | L | G | . |
S | G | E | L | G | K | E | I | A | I | E | A | Q | R | L | G | V | E | V | V | A | V | D | R | Y | A | N | A | P | A | M | Q | V | A | H | R | . |
. |
. |
. |
S | Y | V | G | N | M | M | D | K | D | F | L | W | S | V | V | E | R | E | K |
Template Known Secondary structure |   |
|
|
|
|
|
| T | T | S | T | T |
|
|  |  |  |  |  | S | . |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | T | T |
|  |  |  |  |  | S | S |  | . | . | . | . |  |  |  | S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | C | I | L | V | D | L | A | S | V | K | N | G | P | L | Q | A | M | L | V | A | H |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
P | D | A | I | I | P | E | I | E | A | I | N | L | D | A | L | F | E | F | E | K | D | G |
Template Known Secondary structure |   |
| S |  |  |  |  |
| S | S |
| S |
|  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|