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Job DescriptionP07023
Confidence98.61%DateThu Jan 5 11:00:05 GMT 2012
Rank139Aligned Residues161
% Identity16%Templatec2d0iC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:dehydrogenase; PDBTitle: crystal structure ph0520 protein from pyrococcus horikoshii ot3
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90. ........100.........110.........120.........130
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Query Sequence  PDLIEDVLRRVMRESYSSENDKGF. . . . . . . . . . . . . . . . . KTLCPSLRPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQ
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Template Sequence  EAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILG. MGAIGKAIARRLIPFGVKLYYWSR
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T
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   99100.........110.........120.........130.........140.........150... ......160.........170.......
 
   131 ........140.........150.. .......160. ........170..... ....180.........190...
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Query Sequence  H. . . . . . . . . . . DWDRAADIVADAGMVIVSVPI. HVTEQVIGK. . LPPLPKDCILVDLA. . . SVKNGPLQAMLVAHDGPV
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Template Sequence  HRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLE. GKYLVNIGRGALVDEKAVTEAIKQGKLKG
Template Known Secondary structure  T






S




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   178.180.........190.........200.........210.........220....... ..230.........240.........250......
 
   194.....200. ........210...... ...220.........230
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Query Sequence  LGLHPMFG. . . . PDSGSLAKQVVVWCD. . . GRKPEAYQWFLEQI
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Template Sequence  YATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDVGFRA
Template Known Secondary structure  S

SSSS
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GGGG
TTT

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   257..260.........270.........280.........290.........300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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