Job Description P07023 Confidence 98.76% Date Thu Jan 5 11:00:05 GMT 2012 Rank 120 Aligned Residues 160 % Identity 19% Template c2cukC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glycerate dehydrogenase/glyoxylate reductase; PDBTitle: crystal structure of tt0316 protein from thermus thermophilus hb8 Resolution 2.00 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.															.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Query Sequence		P	D	L	I	E	D	V	L	R	R	V	M	R	E	S	Y	S	S	E	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																										.	.
Template Conservation																																																						.
Template Sequence		E	A	T	A	D	L	T	L	A	L	L	L	A	V	A	R	R	V	V	E	G	A	A	Y	A	R	D	G	L	W	K	A	W	H	P	E	L	L	L	G	L	D	L	Q	G	L	T	L	G	L	V	G	.	M	G	R	I	G	Q	A	V	A	K	R	A	L	A	F	G	M	R	V	V	Y	H	A	R	T	P	K
Template Known Secondary structure																	T	T										T	T							T	T	T	T						T	T							S	.		S													T	T								S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
						132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																							.									.	.															.	.	.																							.	.	.	.
Query SS confidence		.	.	.	.																							.									.	.															.	.	.																							.	.	.	.
Query Sequence		.	.	.	.	D	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	.	V	T	E	Q	V	I	G	K	.	.	L	P	P	L	P	K	D	C	I	L	V	D	L	A	.	.	.	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	.	.	.	.
Query Conservation		.	.	.	.																							.									.	.															.	.	.																							.	.	.	.
Alig confidence		.	.	.	.																							.									.	.															.	.	.													.										.	.	.	.
Template Conservation																																																																				.
Template Sequence		P	L	P	Y	P	F	L	S	L	E	E	L	L	K	E	A	D	V	V	S	L	H	T	P	L	T	P	E	T	H	R	L	L	N	R	E	R	L	F	A	M	K	R	G	A	I	L	L	N	T	A	R	G	A	L	V	D	T	E	A	L	V	E	A	L	R	.	G	H	L	F	G	A	G	L	D	V	T	D	P
Template Known Secondary structure		S		S	S		B											S										T	T	T	T	T		B						T	T	S		T	T							S		G	G	G	B											.		T	S	S					S			S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.
			198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.																				.	.	.
Query SS confidence		.																				.	.	.
Query Sequence		.	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	.	.	.	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I
Query Conservation		.																				.	.	.
Alig confidence		.		.																		.	.	.
Template Conservation				.
Template Sequence		E	P	.	L	P	P	G	H	P	L	Y	A	L	P	N	A	V	I	T	P	H	I	G	S	A	G	R	T	T	R	E	R	M	A	E	V	A
Template Known Secondary structure		S	S	.			T	T	S	G	G	G	G		T	T						S		T	T
Template Predicted Secondary structure				.
Template SS confidence
		258	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions