Job Description P07023 Confidence 98.59% Date Thu Jan 5 11:00:05 GMT 2012 Rank 142 Aligned Residues 162 % Identity 17% Template c1ybaC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: the active form of phosphoglycerate dehydrogenase Resolution 2.24 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.												.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query Sequence		P	D	L	I	E	D	V	L	R	R	V	M	R	E	S	Y	S	S	E	N	.	.	.	.	.	.	.	.	.	.	.	D	K	G	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																			.																											.	.	.	.
Template Conservation																																																			.
Template Sequence		R	S	V	A	E	L	V	I	G	E	L	L	L	L	L	R	G	V	P	E	A	N	A	K	A	H	R	G	V	W	N	K	L	A	A	G	S	F	E	A	R	G	K	K	L	G	I	I	G	.	Y	G	H	I	G	T	Q	L	G	I	L	A	E	S	L	G	X	Y	V	Y	F	Y	D	I	E	N	K	L	P	L
Template Known Secondary structure																	T	T										T	T							T	T				S	T	T								.		S													T	T								S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
							133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																					.										.	.															.	.	.																							.	.	.	.
Query SS confidence		.	.	.	.	.																					.										.	.															.	.	.																							.	.	.	.
Query Sequence		.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	.	H	V	T	E	Q	V	I	G	K	.	.	L	P	P	L	P	K	D	C	I	L	V	D	L	A	.	.	.	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	.	.	.	.
Query Conservation		.	.	.	.	.																					.										.	.															.	.	.																							.	.	.	.
Alig confidence		.	.	.	.	.																					.										.	.															.	.	.																							.	.	.	.
Template Conservation
Template Sequence		G	N	A	T	Q	V	Q	H	L	S	D	L	L	N	X	S	D	V	V	S	L	H	V	P	E	N	P	S	T	K	N	X	X	G	A	K	E	I	S	L	X	K	P	G	S	L	L	I	N	A	S	R	G	T	V	V	D	I	P	A	L	C	D	A	L	A	S	K	H	L	A	G	A	A	I	D	V	F	P	T
Template Known Secondary structure		T	T					S	S									S								S	S	T	T	T	T	T		B								S		T	T							S		T	T	S	B											T	T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
			198	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.				.	.	.																	.	.	.
Query SS confidence		.				.	.	.																	.	.	.
Query Sequence		.	P	M	F	.	.	.	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	.	.	.	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I
Query Conservation		.				.	.	.																	.	.	.
Alig confidence		.				.	.	.																	.	.	.
Template Conservation
Template Sequence		E	P	A	T	N	S	D	P	F	T	S	P	L	C	E	F	D	N	V	L	L	T	P	H	I	G	G	S	T	Q	E	A	Q	E	N	I	G	L	E	V
Template Known Secondary structure				S	S	T	T	S					G	G	G	G		T	T					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions