Job Description P07023 Confidence 99.56% Date Thu Jan 5 11:00:05 GMT 2012 Rank 37 Aligned Residues 238 % Identity 11% Template c1yb4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:tartronic semialdehyde reductase; PDBTitle: crystal structure of the tartronic semialdehyde reductase from2 salmonella typhimurium lt2 Resolution 2.40 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.													.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	.	.	.	.	G	K	L
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Alig confidence									.																											.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation									.
Template Sequence		X	K	L	G	F	I	G	.	L	G	I	X	G	S	P	X	A	I	N	L	A	R	A	G	H	Q	L	H	V	T	T	I	G	P	V	A	D	E	L	L	S	L	G	A	V	N	V	E	T	A	R	Q	V	T	E	F	A	D	I	I	F	I	X	V	P	D	T	P	Q	V	E	D	V	L	F	G	E	H	G	C
Template Known Secondary structure									.		S	T	T											T	T								S	S								T	T	T		B			S	S							T		S							S	S										S	T	T	S	S
Template Predicted Secondary structure									.
Template SS confidence
		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		163	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																										.	.	.
Query SS confidence				.																										.	.	.
Query Sequence		P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	.	.	.	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H
Query Conservation				.																										.	.	.
Alig confidence				.																										.	.	.								.																			.
Template Conservation																																								.																			.
Template Sequence		A	K	T	S	L	Q	G	K	T	I	V	D	X	S	S	I	S	P	I	E	T	K	R	F	A	Q	R	V	N	E	X	G	A	D	Y	L	D	A	.	P	V	S	G	G	E	I	G	A	R	E	G	T	L	S	I	X	V	.	G	G	E	Q	K	V	F	D	R	V	K	P	L	F	D	I	L	G	K	N	I	T
Template Known Secondary structure		T	T	S			T	T							S																T	T	T							.				S								T							.		S
Template Predicted Secondary structure																																								.																			.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																											.	.	.	.																																																			.
Query SS confidence																											.	.	.	.																																																			.
Query Sequence		R	I	S	A	V	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	.	.	.	.	G	L	H	L	A	E	E	N	V	Q	L	E	Q	L	L	A	L	S	S	P	I	Y	R	L	E	L	A	M	V	G	R	L	F	A	Q	D	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	.
Query Conservation																											.	.	.	.																																																			.
Alig confidence																											.	.	.	.																									.	.	.	.	.					.	.	.	.														.
Template Conservation																																																							.	.	.	.	.					.	.	.	.
Template Sequence		L	V	G	G	N	G	D	G	Q	T	C	K	V	A	N	Q	I	I	V	A	L	N	I	E	A	V	S	E	A	L	V	F	A	S	K	A	G	A	D	P	V	R	V	R	Q	A	L	X	G	G	F	A	S	.	.	.	.	.	S	R	I	L	.	.	.	.	E	V	H	G	E	R	X	I	N	R	T	F	E	P
Template Known Secondary structure					S	T	T																														T	T											T	S	S	S	S		.	.	.	.	.					.	.	.	.									T	T
Template Predicted Secondary structure																																																							.	.	.	.	.					.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.						.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		L	A	L	I	K	R	Y	Y	K	R	F	G	E	A	I	E	L	L	E	Q	G	D	K	.	.	.	.	.	Q	A	F	I	D	S	F	R	K	V	E	H
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.
Template Conservation
Template Sequence		G	F	K	I	A	L	H	Q	K	D	L	N	L	A	L	Q	S	A	K	A	L	A	L	N	L	P	N	T	A	T	C	Q	E	L	F	N	T	C	A	A
Template Known Secondary structure		S	S	B																		T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions