Job Description P07023 Confidence 98.75% Date Thu Jan 5 11:00:05 GMT 2012 Rank 122 Aligned Residues 162 % Identity 17% Template c1wwkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:phosphoglycerate dehydrogenase; PDBTitle: crystal structure of phosphoglycerate dehydrogenase from pyrococcus2 horikoshii ot3 Resolution 1.90 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.												.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query Sequence		P	D	L	I	E	D	V	L	R	R	V	M	R	E	S	Y	S	S	E	N	D	K	G	F	.	.	.	.	.	.	.	.	.	.	.	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.															.																										.	.	.	.	.
Template Conservation																																																			.
Template Sequence		R	S	V	A	E	L	A	V	G	L	M	F	S	V	A	R	K	I	A	F	A	D	R	K	M	R	E	G	V	W	A	K	K	E	A	M	G	I	E	L	E	G	K	T	I	G	I	I	G	.	F	G	R	I	G	Y	Q	V	A	K	I	A	N	A	L	G	M	N	I	L	L	Y	D	P	Y	P	N	E	E	R
Template Known Secondary structure																	T	T									T	T	T				T	T	T							T	T								.		S													T	T								S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
								132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																							.									.	.															.	.	.
Query SS confidence		.	.	.	.	.	.																							.									.	.															.	.	.
Query Sequence		.	.	.	.	.	.	D	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	H	.	V	T	E	Q	V	I	G	K	.	.	L	P	P	L	P	K	D	C	I	L	V	D	L	A	.	.	.	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M
Query Conservation		.	.	.	.	.	.																							.									.	.															.	.	.
Alig confidence		.	.	.	.	.	.																							.									.	.															.	.	.
Template Conservation
Template Sequence		A	K	E	V	N	G	K	F	V	D	L	E	T	L	L	K	E	S	D	V	V	T	I	H	V	P	L	V	E	S	T	Y	H	L	I	N	E	E	R	L	K	L	M	K	K	T	A	I	L	I	N	T	S	R	G	P	V	V	D	T	N	A	L	V	K	A	L	K	E	G	W	I	A	G	A	G	L	D	V	F
Template Known Secondary structure					T	T														S									S	T	T	T	T	T		B								S		T	T							S		G	G	G	B												T	S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure				.	.	.	.																.	.	.
Query SS confidence				.	.	.	.																.	.	.
Query Sequence		F	G	.	.	.	.	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	.	.	.	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I
Query Conservation				.	.	.	.																.	.	.
Alig confidence				.	.	.	.																.	.	.
Template Conservation
Template Sequence		E	E	E	P	L	P	K	D	H	P	L	T	K	F	D	N	V	V	L	T	P	H	I	G	A	S	T	V	E	A	Q	E	R	A	G	V	E	V
Template Known Secondary structure		S	S	S	S			T	T		G	G	G	G		T	T					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions