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Job DescriptionP07023
Confidence99.13%DateThu Jan 5 11:00:05 GMT 2012
Rank91Aligned Residues201
% Identity16%Templatec1txgA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: structure of glycerol-3-phosphate dehydrogenase from archaeoglobus2 fulgidus
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.. .......140.........150.
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Query Sequence  PVVIVGGGGQMGRLFEKMLTLSGYQVRILEQHD. . . . . . . . . . . . . . . . . . . . . . . . . . . . WDRAADIVADAGMVIVSVP
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Template Sequence  IVSILG. AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS
Template Known Secondary structure  S.





GGGTT

BTTTTB


S
GGGTT
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S
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   2..... ..10.........20.........30.........40.........50.........60.........70.........80
 
   152.......160.... .....170.... .....180.........190.........200.... .....210.........220.
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Query Sequence  IHVTEQVIGKLPP. LPKDCILVDL. . . . . . ASVKNGPLQAMLVAHDGPVLGLHPMFGPDS. . . GSLAKQVVVWCDGRKPE
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Template Sequence  TDGVLPVMSRILPYLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREVAKRMPTTVVFSSPSES
Template Known Secondary structure  GGGTTT

S



STTTTSTT
GGGSS

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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  AYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQ
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Template Sequence  SANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIEILGGDRE
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BTTS
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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