Job Description P07023 Confidence 99.38% Date Thu Jan 5 11:00:05 GMT 2012 Rank 61 Aligned Residues 176 % Identity 16% Template c1pgjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: x-ray structure of 6-phosphogluconate dehydrogenase from the protozoan2 parasite t. brucei Resolution 2.82 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	.	H	V
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation								.
Template Sequence		D	V	G	V	V	G	.	L	G	V	M	G	A	N	L	A	L	N	I	A	E	K	G	F	K	V	A	V	F	N	R	T	Y	S	K	S	E	E	F	M	K	A	N	A	S	A	P	F	A	G	N	L	K	A	F	E	T	M	E	A	F	A	A	S	L	K	K	P	R	K	A	L	I	L	V	Q	A	G	A	A
Template Known Secondary structure		S						.		S													T	T								S	S											T	T	T	S	T	T	G	G	G					S									B		S	S										S
Template Predicted Secondary structure								.
Template SS confidence
		3	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		155	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure												.																										.	.	.
Query SS confidence												.																										.	.	.
Query Sequence		T	E	Q	V	I	G	K	L	P	P	.	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	.	.	.	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I
Query Conservation												.																										.	.	.
Alig confidence												.																										.	.	.								.													.	.
Template Conservation																																																.													.	.
Template Sequence		T	D	S	T	I	E	Q	L	K	K	V	F	E	K	G	D	I	L	V	D	T	G	N	A	H	F	K	D	Q	G	R	R	A	Q	Q	L	E	A	A	G	L	R	F	L	G	M	.	G	I	S	G	G	E	E	G	A	R	K	G	.	.	P	A	F	F	P	G	G	T	L	S	V	W	E	E	I	R	P	I	V
Template Known Secondary structure															T	T																							T	T	T							.				S									.	.
Template Predicted Secondary structure																																																.													.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		231	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.																	.													.	.	.
Query SS confidence								.	.	.	.	.	.	.																	.													.	.	.
Query Sequence		Q	V	W	G	A	R	.	.	.	.	.	.	.	L	H	R	I	S	A	V	E	H	D	Q	N	M	A	F	I	.	Q	A	L	R	H	F	A	T	F	A	Y	G	.	.	.	L	H	L	A	E	E	N	V	Q	L	E	Q	L	L	A
Query Conservation								.	.	.	.	.	.	.																	.													.	.	.
Alig confidence								.	.	.	.	.	.	.																	.													.	.	.
Template Conservation
Template Sequence		E	A	A	A	A	K	A	D	D	G	R	P	C	V	T	M	N	G	S	G	G	A	G	S	C	V	K	M	Y	H	N	S	G	E	Y	A	I	L	Q	I	W	G	E	V	F	D	I	L	R	A	M	G	L	N	N	D	E	V	A	A
Template Known Secondary structure					S		B		T	T	S		B	S						S	T	T																														T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions