Job Description P07023 Confidence 97.33% Date Thu Jan 5 11:00:05 GMT 2012 Rank 333 Aligned Residues 104 % Identity 19% Template c1nvtA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ Resolution 2.35 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																								.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																	.
Template Sequence		R	V	K	D	K	N	I	V	I	Y	G	.	A	G	G	A	A	R	A	V	A	F	E	L	A	K	D	N	.	N	I	I	I	A	N	R	T	V	E	K	A	E	A	L	A	K	E	I	A	E	K	L	N	K	K	F	G	E	E	V	K	F	S	G	L	D	V	D	L	D	G	V	D	I	I	I	N	A	T	P
Template Known Secondary structure					S								.		S											T	S	S	S	.							S	S																T												T	T				T	T								S
Template Predicted Secondary structure													.																	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		152	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure									.	.	.	.																				.
Query SS confidence									.	.	.	.																				.
Query Sequence		I	H	V	T	E	Q	V	.	.	.	.	I	G	K	L	P	P	L	P	K	D	C	I	L	V	D	L	A	S	V	.	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F
Query Conservation									.	.	.	.																				.
Alig confidence									.	.	.	.																				.
Template Conservation
Template Sequence		I	G	M	Y	P	N	I	D	V	E	P	I	V	K	A	E	K	L	R	E	D	M	V	V	M	D	L	I	Y	N	P	L	E	T	V	L	L	K	E	A	K	K	V	N	A	K	T	I	N	G	L	G	M	L
Template Known Secondary structure		T	T		T	T			S	S			S	S		S	T	T			S	S	S								S	S	S	S									T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions