Job Description P07023 Confidence 96.90% Date Thu Jan 5 11:00:05 GMT 2012 Rank 431 Aligned Residues 110 % Identity 15% Template c1npyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 Resolution 1.75 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140											.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																				.									.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.									.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	.	Q	V	R	I	L	E	Q	H	.	.	D	W	D	R	A	A	D	I	V	.	.	.	.	.	.	.	.	.	.	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E
Query Conservation																																				.									.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																		.									.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		I	E	K	Y	H	L	N	K	N	A	K	V	I	V	H	G	.	S	G	G	M	A	K	A	V	V	A	A	F	K	N	S	G	F	E	K	L	K	I	Y	A	R	N	V	K	T	G	Q	Y	L	A	A	L	Y	G	Y	A	Y	I	N	S	L	E	N	Q	Q	A	D	I	L	V	N	V	T	S	I	G	M	K	G
Template Known Secondary structure					T	T			T	T	S							.	S	S	T	T											T	T									S													T					S			T	T				S						S	S	T	T		T	T
Template Predicted Secondary structure																		.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure										.	.	.	.	.														.
Query SS confidence										.	.	.	.	.														.
Query Sequence		Q	V	I	G	K	L	P	P	.	.	.	.	.	L	P	K	D	C	I	L	V	D	L	A	S	V	.	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F
Query Conservation										.	.	.	.	.														.
Alig confidence										.	.	.	.	.														.
Template Conservation
Template Sequence		G	K	E	E	M	D	L	A	F	P	K	A	F	I	D	N	A	S	V	A	F	D	V	V	A	M	P	V	E	T	P	F	I	R	Y	A	Q	A	R	G	K	Q	T	I	S	G	A	A	V	I
Template Known Secondary structure		S	T	T	T	T	S		S	S									S								S	S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions