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Job DescriptionP07023
Confidence97.36%DateThu Jan 5 11:00:05 GMT 2012
Rank323Aligned Residues120
% Identity18%Templatec1j6uA_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc; PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110... ......120.........130......... 140.........150.........160..
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Query Sequence  RPVVIVGGGGQMGRL. FEKMLTLSGYQVRILEQHDWDRAADI. . . . . . . . . . . . . . . VADAGMVIVSVPIHVTEQVIGKL
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Template Sequence  XKIHFVG. IGGIGXSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAVRDDNPEIVRA
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   1...... ..10.........20.........30.........40.........50.........60.........70.........
 
   163......170 ........ .180.........190.. .......200.........210........
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Query Sequence  PPLPKDCI. . . . . . . . . . . . . . . . LVDLASVK. . . . . NGPLQAMLVAHDGP. . . VLGLHPMFGPDSGSLAKQVVVWCDGR
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Template Sequence  RXERVPIENRLHYFRDTLKREKKEEFAVTGTDGKTTTTAXVAHVLKHLRKSPTVFLGGIXDSLEHGNYEKGNGPVVYELD
Template Known Secondary structure  TT





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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   219
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Query Sequence  K
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Template Sequence  E
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   160
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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