Job Description P07023 Confidence 98.55% Date Thu Jan 5 11:00:05 GMT 2012 Rank 145 Aligned Residues 160 % Identity 16% Template c1j4aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus Resolution 1.90 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.											.	.	.	.
Predicted Secondary structure																							.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	E	D	V	L	R	R	V	M	R	E	S	Y	S	S	E	N	D	K	G	.	.	.	.	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	.	.	.	.	.	.	.	.	.	.	D	W	D	R
Query Conservation																							.	.	.	.																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		Q	A	A	R	I	L	R	Q	D	K	A	M	D	E	K	V	A	R	H	D	L	R	W	A	P	T	I	G	R	E	V	R	D	Q	V	V	G	V	V	G	.	T	G	H	I	G	Q	V	F	M	Q	I	M	E	G	F	G	A	K	V	I	T	Y	D	I	F	R	N	P	E	L	E	K	K	G	Y	Y	V	D	S
Template Known Secondary structure									T										T	T					T	T						G	G	G	S							.		S													T	T								S	S								T	T		B		S
Template Predicted Secondary structure																																										.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																			.										.	.															.	.	.																													.	.	.	.	.	.
Query SS confidence																			.										.	.															.	.	.																													.	.	.	.	.	.
Query Sequence		A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	.	H	V	T	E	Q	V	I	G	K	.	.	L	P	P	L	P	K	D	C	I	L	V	D	L	A	.	.	.	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	.	.	.	.	.	.
Query Conservation																			.										.	.															.	.	.																													.	.	.	.	.	.
Alig confidence																			.										.	.															.	.	.																						.							.	.	.	.	.	.
Template Conservation																																																																					.
Template Sequence		L	D	D	L	Y	K	Q	A	D	V	I	S	L	H	V	P	D	V	P	A	N	V	H	M	I	N	D	E	S	I	A	K	M	K	Q	D	V	V	I	V	N	V	S	R	G	P	L	V	D	T	D	A	V	I	R	G	L	D	S	G	K	I	F	G	Y	A	M	.	D	V	Y	E	G	E	V	G	I	F	N	E
Template Known Secondary structure										S						S				G	G	G	T	T		B	S							S		T	T							S		G	G	G	B												T	S							.	S			T	T		T	T	T	T	T	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.
														204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	G	S	L	A	K	Q	V	V	V	W	C	D	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	W	E	G	K	E	F	P	D	A	R	L	A	D	L	I	A	R	P	N	V	L	V	T	P	K	T	A	F	Y	T	T	H	A	V	R	N	M	V	V
Template Known Secondary structure				T	T	S			S											T	T					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions