Job Description P07023 Confidence 97.34% Date Thu Jan 5 11:00:05 GMT 2012 Rank 331 Aligned Residues 154 % Identity 16% Template c1gqqA_ PDB info PDB header:cell wall biosynthesis Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: murc - crystal structure of the apo-enzyme from haemophilus2 influenzae Resolution 3.1 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure															.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence															.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		R	P	V	V	I	V	G	G	G	G	Q	M	G	.	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	W	D	R	A	A	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	A	G	M	V	I	V	S	V	P	I	H	V	T	E	Q	V	I	G	K	.
Query Conservation															.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence									.						.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation									.
Template Sequence		Q	Q	I	H	F	I	G	.	I	G	G	A	G	M	S	G	I	A	E	I	L	L	N	E	G	Y	Q	I	S	G	S	D	I	A	D	G	V	V	T	Q	R	L	A	Q	A	G	A	K	I	Y	I	G	H	A	E	E	H	I	E	G	A	S	V	V	V	V	S	S	A	I	K	D	D	N	P	E	L	V	T	S
Template Known Secondary structure								S	.	T	T	S	T	T												T								S			S										T						S			G	G	G	G	T	T		S						S	S	S		T	T
Template Predicted Secondary structure									.
Template SS confidence
		19	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
															162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	P	L	P	K	D	C	I	L	V	D	L	A	S	V	K	.	.	.	.	.	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	G	P	D	S	G	S	L	A	K	.	.	.	Q	V	V	V	W	C	D	G	R	K	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																																.	.	.
Template Conservation
Template Sequence		K	Q	K	R	I	P	V	I	Q	R	A	Q	M	L	A	E	I	M	R	F	R	H	G	I	A	V	A	G	T	H	G	K	T	T	T	T	A	M	I	S	M	I	Y	T	Q	A	K	L	D	P	T	F	V	S	R	Y	L	I	A	E	A	D	E	F	L	H	L	Q	P	M	V	S	V	V	T	N	M	E	F	E
Template Known Secondary structure				T																	T	S							S	S	S	S															T	T																			S				S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H	R	I	S	A	V	E	H	D	Q	N	M	A	F	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	K	A	T	Y	V	K	F	L	H	N	L	P	F	Y	G	L	A	V	M	C	A	D	D	P	V	L	M	E	L	V	P
Template Known Secondary structure													T	S		T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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