Job Description P07023 Confidence 98.55% Date Thu Jan 5 11:00:05 GMT 2012 Rank 144 Aligned Residues 162 % Identity 18% Template c1dxyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase Resolution 1.86 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.													.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Query Sequence		P	D	L	I	E	D	V	L	R	R	V	M	R	E	S	Y	S	S	.	.	.	.	.	.	.	.	.	.	.	.	E	N	D	K	G	F	K	T	L	C	P	S	L	R	P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																					.																											.	.	.
Template Conservation																																																				.
Template Sequence		A	A	I	A	E	F	A	L	T	D	T	L	Y	L	L	R	N	M	G	K	V	Q	A	Q	L	Q	A	G	D	Y	E	K	A	G	T	F	I	G	K	E	L	G	Q	Q	T	V	G	V	M	G	.	T	G	H	I	G	Q	V	A	I	K	L	F	K	G	F	G	A	K	V	I	A	Y	D	P	Y	P	M	K	G
Template Known Secondary structure																	T	T										T	T						T							G	G	G	S							.		S													T	T								S	S			S	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
								133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.	.	.	.	.																					.										.	.															.	.	.
Query SS confidence		.	.	.	.	.	.																					.										.	.															.	.	.
Query Sequence		.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V	S	V	P	I	.	H	V	T	E	Q	V	I	G	K	.	.	L	P	P	L	P	K	D	C	I	L	V	D	L	A	.	.	.	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F
Query Conservation		.	.	.	.	.	.																					.										.	.															.	.	.
Alig confidence		.	.	.	.	.	.																					.										.	.															.	.	.
Template Conservation
Template Sequence		D	H	P	D	F	D	Y	V	S	L	E	D	L	F	K	Q	S	D	V	I	D	L	H	V	P	G	I	E	Q	N	T	H	I	I	N	E	A	A	F	N	L	M	K	P	G	A	I	V	I	N	T	A	R	P	N	L	I	D	T	Q	A	M	L	S	N	L	K	S	G	K	L	A	G	V	G	I	D	T	Y	E
Template Known Secondary structure				T	T														S										G	G	G	T	T	S	B								S		T	T							S		T	T	S	B											T	T	S							S	S		T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		201																		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	S	G	S	L	A	K	Q	V	V	V	W	C	D	.	.	.	G	R	K	P	E	A	Y	Q	W	F	L	E	Q	I
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		Y	E	T	E	D	L	L	N	L	A	K	H	G	S	F	K	D	P	L	W	D	E	L	L	G	M	P	N	V	V	L	S	P	H	I	A	Y	Y	T	E	T	A	V	H	N	M	V	Y	F	S
Template Known Secondary structure		T												S	S											T		T	T					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions