Job Description P07023 Confidence 99.14% Date Thu Jan 5 11:00:05 GMT 2012 Rank 90 Aligned Residues 225 % Identity 18% Template c1dliA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation Resolution 2.31 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																																.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	V	I	V	G	G	G	G	Q	M	G	R	L	F	E	K	M	L	T	L	S	G	Y	Q	V	R	I	L	E	Q	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	R	A	A	D	I	V	A	D	A	G	M	V	I	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.															.
Template Sequence		K	I	A	V	A	G	.	S	G	Y	V	G	L	S	L	G	V	L	L	S	L	.	Q	N	E	V	T	I	V	D	I	L	P	S	K	V	D	K	I	N	N	G	L	S	P	I	Q	D	E	Y	I	E	Y	Y	L	K	S	K	Q	L	S	I	K	A	T	L	D	S	K	A	A	Y	K	E	A	E	L	V	I	I
Template Known Secondary structure								.		S											T	T	.	T	S							S										T	T			S	S												S								S										S
Template Predicted Secondary structure								.															.
Template SS confidence
		2	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		149	150	.	.												.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Query Sequence		S	V	P	I	.	.	.	.	.	.	.	.	.	.	.	H	V	T	E	Q	V	I	G	K	L	P	P	L	P	K	D	C	I	L	V	D	L	A	S	V	K	N	G	P	L	Q	A	M	L	V	A	H	D	G	P	V	L	G	L	H	P	M	F	.	.	.	G	P	D	S	G	S	L	A	K	Q	V	V	V	W
Query Conservation						.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.
Template Conservation
Template Sequence		A	T	P	T	N	Y	N	S	R	I	N	Y	F	D	T	Q	H	V	E	T	V	I	K	E	V	L	S	V	N	S	H	A	T	L	I	I	K	S	T	I	P	I	G	F	I	T	E	M	R	Q	K	F	Q	T	D	R	I	I	F	S	P	E	F	L	R	E	S	K	A	L	Y	D	N	L	Y	P	S	R	I	I
Template Known Secondary structure									T	T	T	T																			S	S							S				T	T										T		S											T	T	S	T	T					S		S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		215	.	.	.	.											220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																									.	.																												.
Query SS confidence							.	.	.	.	.	.	.	.	.	.																									.	.																												.
Query Sequence		C	D	G	R	K	.	.	.	.	.	.	.	.	.	.	P	E	A	Y	Q	W	F	L	E	Q	I	Q	V	W	G	A	R	L	H	R	I	S	A	V	.	.	E	H	D	Q	N	M	A	F	I	Q	A	L	R	H	F	A	T	F	A	Y	G	L	H	L	A	E	E	.	N	V	Q	L	E	Q	L	L	A	L	S
Query Conservation							.	.	.	.	.	.	.	.	.	.																									.	.																												.
Alig confidence							.	.	.	.	.	.	.	.	.	.																									.	.																												.
Template Conservation
Template Sequence		V	S	C	E	E	N	D	S	P	K	V	K	A	D	A	E	K	F	A	L	L	L	K	S	A	A	K	K	N	N	V	P	V	L	I	M	G	A	S	E	A	E	A	V	K	L	F	A	N	T	Y	L	A	L	R	V	A	Y	F	N	E	L	D	T	Y	A	E	S	R	K	L	N	S	H	M	I	I	Q	G	I
Template Known Secondary structure						T	T	S																				S	S	S																																								T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		282												.	.	.									.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.																													.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.																													.
Query Sequence		S	.	.	.	.	.	.	.	.	.	.	.	P	I	Y	.	.	.	.	.	.	.	.	R	L	E	L	A	M	V	G	R	L	F	A	Q	D	P	Q	L	Y	A	D	I	I	M	S	S	E	R	N	.	L	A	L	I	K	R	Y	Y	K	R	F	G	E
Query Conservation			.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.																													.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		S	Y	D	D	R	I	G	M	H	Y	N	N	P	S	F	G	Y	G	G	Y	C	L	P	K	D	T	K	Q	L	L	A	N	Y	N	N	I	P	Q	T	L	I	E	A	I	V	S	S	N	N	V	R	K	S	Y	I	A	K	Q	I	I	N	V	L	K	E
Template Known Secondary structure			T	S	T	T	T		S	S	S					S				S	S													T	T	T	S	S		S																										T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions