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Job DescriptionP77324
Confidence100.00%DateThu Jan 5 12:27:44 GMT 2012
Rank6Aligned Residues265
% Identity25%Templatec2w3rG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase (desulfo form)2 from rhodobacter capsulatus in complex with hypoxanthine
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KAFTYERVNTPAEAALSAQRVPGAKFIAGGTNLLDLMKLEIETPTHLIDVNGLGLDKIEVTDAGGLRIGALVRNTDLAAH
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Template Sequence  FTLPAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRA.
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B

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TT
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S
TT
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TTTT
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   164.....170.........180.........190.........200.........210.........220.........230.........240..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  ERVRRDYAVLSRALLAGASGQLRNQATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAALEGFSRQHAVVGVSEACIATH
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Template Sequence  . FAEGPHPALAGLLRRFASEQVRQVATIGGNIA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NGSP
Template Known Secondary structure  .TTT
TTSSS
TT
B...........................................TT
T
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   255....260.........270.........280...... ...290
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  PSDMAVAMRLLDAVVETITPEGKTRSITLADFYHPPGKTPHIETALLPGELIVAVTLPPPLGGKHIYRKVRDRASYAFAL
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Template Sequence  IGDGPPALIAMGASLTLRRGQE. RRRMPLEDFFLE. . . . . YRKQDRRPGEFVESVTLPKSAPGLRCY. KLSKRFDQDISA
Template Known Secondary structure  T
STT
TT.GGGG.....TTS

TT
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   291........300.........310.. .......320.... .....330.........340.........350. ........360...
 
   242.......250.. .......260.........270....... ..280.........290.........300.......
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Query Sequence  VSVAAIIQPDG. . . . SGRVALGGVAHKPWRIEAADAQLSQ. . . . . . . . . . GAQAVYDTLFASAHPTAENTFKLLLAKRTL
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Template Sequence  VCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMA
Template Known Secondary structure  TTSSSSS

TTTT
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GGG




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   364.....370.........380.........390.........400.........410.........420.........430.........440...
 
   308.310........
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Query Sequence  ASVLAEARAQA
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Template Sequence  LRYVRELSGEA
Template Known Secondary structure  TT

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   444.....450....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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