Return to main results Retrieve Phyre Job Id

Job DescriptionP77324
Confidence95.84%DateThu Jan 5 12:27:44 GMT 2012
Rank43Aligned Residues101
% Identity17%Templatec2exrA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cytokinin dehydrogenase 7; PDBTitle: x-ray structure of cytokinin oxidase/dehydrogenase (ckx)2 from arabidopsis thaliana at5g21482
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10......... 20........ .30.........40...... ...50....... ..60.......
Predicted Secondary structure 










...



..










..






......



Query SS confidence 


















. . .








. .

















. .










. . . . . .









Query Sequence  MKAFTYERVNTPAEAALSA. . . QRVPGAKFI. . AGGTNLLDLMKLEIETPT. . HLIDVNGLGLD. . . . . . KIEVTDAGGL
Query Conservation 
  
 
  
 

 

  

...   
 
 

..





   
      
 .. 



  
 

......  
      
Alig confidence 


















...








..





.....






..










......









Template Conservation    
  

 
 
  

   
  
       
  





 ..... 
 
    




   
                  
Template Sequence  VKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSI. . . . . NGQAXAEGGLVVDXSTTAENHFEVGYLSGGDATAFV
Template Known Secondary structure 


S
SSSSS

SSS

S.....SSTT

TTSGGGGTTS


SSSSS
Template Predicted Secondary structure 















.....



















Template SS confidence 















































































   60.........70.........80.........90........ .100.........110.........120.........130....
 
   68.70.........80.........90.........100.........110....
Predicted Secondary structure 









Query SS confidence 














































Query Sequence  RIGALVRNTDLAAHERVRRDYAVLSRALLAGASGQLRNQATTAGNLL
Query Conservation   


 


 

     
    
 
  

  


 



 






 
Alig confidence 












........

























Template Conservation   
 

     
  ........                     

   
Template Sequence  DVSGGALWEDVLK. . . . . . . . RCVSEYGLAPRSWTDYLGLTVGGTLS
Template Known Secondary structure  TT
B........S
S


S

SSBT
Template Predicted Secondary structure 



........












Template SS confidence 














































   135....140....... ..150.........160.........170...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions