Job Description P76251 Confidence 100.00% Date Thu Jan 5 12:21:15 GMT 2012 Rank 5 Aligned Residues 345 % Identity 36% Template d1v53a1 SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 2.85

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	M	R	I	A	A	I	P	G	D	G	I	G	K	E	V	L	P	E	G	I	R	V	L	Q	A	A	A	E	R	W	G	F	A	L	S	F	E	Q	M	E	W	A	S	C	E	Y	Y	S	H	H	G	K	M	M	P	D	D	W	H	E	Q	L	S	R	F	D	A	I	Y	F	G	A	V	G	W	P	D
Query Conservation
Alig confidence				.																																										.
Template Conservation				.																																										.
Template Sequence		M	K	.	M	K	L	A	V	L	P	G	D	G	I	G	P	E	V	M	D	A	A	I	R	V	L	K	T	V	L	D	N	D	G	H	E	A	V	F	E	N	A	L	I	.	G	G	A	A	I	D	E	A	G	T	P	L	P	E	E	T	L	D	I	C	R	R	S	D	A	I	L	L	G	A	V	G	G	P	K
Template Known Secondary structure				.									S	T	T																	T	T	S	S											.	T								S	S	S	S										T	S	S										G	G
Template Predicted Secondary structure				.																																										.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		82			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																																		.	.
Query SS confidence			.	.																																		.	.
Query Sequence		T	.	.	V	P	D	H	I	S	L	W	G	S	L	L	K	F	R	R	E	F	D	Q	Y	V	N	L	R	P	V	R	L	F	P	G	V	.	.	P	C	P	L	A	G	K	Q	P	G	D	I	D	F	Y	V	V	R	E	N	T	E	G	E	Y	S	S	L	G	G	R	V	N	E	G	T	E	H	E	V	V	I
Query Conservation			.	.																																		.	.
Alig confidence			.	.																																		.	.																																				.
Template Conservation																																																																											.
Template Sequence		W	D	H	N	P	A	S	L	R	P	E	K	G	L	L	G	L	R	K	E	M	G	L	F	A	N	L	R	P	V	K	A	Y	A	T	L	L	N	A	S	P	L	K	R	E	R	V	E	N	V	D	L	V	I	V	R	E	L	T	G	G	L	Y	F	G	R	P	S	E	R	R	G	P	.	G	E	N	E	V	V
Template Known Secondary structure		G	S	S	S		G	G	G														T												G	G	G	T	T	T	S	S	S						T	T										S	S	B	T	T	T		S						S	S	.	T	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	S	V	F	T	R	R	G	V	D	R	I	L	R	Y	A	F	E	L	A	Q	S	R	P	R	K	T	L	T	S	A	T	K	S	N	G	L	A	I	S	M	P	Y	W	D	E	R	V	E	A	M	A	E	N	Y	P	E	I	R	W	D	K	Q	H	I	D	I	L	C	A	R	F	V	M	Q	P	E	R	F
Query Conservation
Alig confidence																										.															.
Template Conservation																										.															.
Template Sequence		D	T	L	A	Y	T	R	E	E	I	E	R	I	I	E	K	A	F	Q	L	A	Q	I	R	.	R	K	K	L	A	S	V	D	K	A	N	V	L	E	.	S	S	R	M	W	R	E	I	A	E	E	T	A	K	K	Y	P	D	V	E	L	S	H	M	L	V	D	S	T	S	M	Q	L	I	A	N	P	G	Q	F
Template Known Secondary structure					B																				T	.	T	S								T	T	T			.														T	T		T	T	S																		G	G	G
Template Predicted Secondary structure																										.															.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.
Predicted Secondary structure																																		.																																										.
Query SS confidence																																		.																																										.
Query Sequence		D	V	V	V	A	S	N	L	F	G	D	I	L	S	D	L	G	P	A	C	T	G	T	I	G	I	A	P	S	A	N	L	.	N	P	E	R	T	F	P	S	L	F	E	P	V	H	G	S	A	P	D	I	Y	G	K	N	I	A	N	P	I	A	T	I	W	A	G	A	M	M	L	D	F	.	L	G	N	G	D
Query Conservation																																		.																																										.
Alig confidence																																		.					.	.	.																																			.			.	.	.
Template Conservation																																							.	.	.																																						.	.	.
Template Sequence		D	V	I	V	T	E	N	M	F	G	D	I	L	S	D	E	A	S	V	I	T	G	S	L	G	M	L	P	S	A	S	L	R	S	D	R	F	.	.	.	G	M	Y	E	P	V	H	G	S	A	P	D	I	A	G	Q	G	K	A	N	P	L	G	T	V	L	S	A	A	L	M	L	R	Y	S	F	G	.	.	.
Template Known Secondary structure		S																	T	T	T	T	S		T	T	S								S	S	S		.	.	.						S	S				G	G	G	T	T	S	S																					.	.	.
Template Predicted Secondary structure																																							.	.	.																																						.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		E	R	F	Q	Q	A	H	N	G	I	L	A	A	I	E	E	V	I	A	H	G	P	K	T	P	D	M	.	.	.	.	K	G	N	A	T	T	P	Q	V	A	D	A	I	C	K	I	I
Query Conservation																													.	.	.	.
Alig confidence		.	.																										.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	E	K	E	A	A	A	I	E	K	A	V	D	D	V	L	Q	D	G	Y	C	T	G	D	L	Q	V	A	N	G	K	V	V	S	T	I	E	L	T	D	R	L	I	E	K	L
Template Known Secondary structure		.	.																		T	T			S	S	S	S			T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions