Return to main results Retrieve Phyre Job Id

Job DescriptionP76251
Confidence98.85%DateThu Jan 5 12:21:15 GMT 2012
Rank31Aligned Residues263
% Identity17%Templated1r8ka_
SCOP infoIsocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PdxA-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10... ......20.... .....30.........40.........50.........60
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Query Sequence  KTMRIAAIPGD. . GIGKEVLPEGI. . . . . . . . . . . . . . RVLQAAAERWGFALSFEQMEWASCEYYSHHGKMMPD. . . . . .
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Template Sequence  SAQRVVITPGEPAGSGPDLVVQLAQRAWPIELVVCADGALLTERAAXLGLPLSLLPYSP. DVPAAPQPAGTLTLLPVSLR
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   3......10.........20.........30.........40.........50.........60. ........70.........80.
 
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . DWHEQLS. . RFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQYVNLRPVRLFPGVPC
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Template Sequence  APAISGQLTVENGPYVVETLARACDGCLNGEFAALITGPVHKGVINDAGISFTGHTEFFEERSQAK. . . KVVXXL. . . . .
Template Known Secondary structure  S

BTTB

GGGTTS
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   82.......90.........100.........110.........120.........130.........140....... ..150...
 
   118.120.........130.........140.........150......... 160.........170.........180. ........190.. ..
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Query Sequence  PLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQE. SVFTRRGVDRILRYAFELAQSR. PRKTLTSATKS. NG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . ATEELRVALATTHLPLRAIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNP
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TS

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   154.....160.........170.........180.........190.........200.........210
 
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Query Sequence  LAISMPYW. . . . . . . . DERVEAMAENYPEIRWDKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPS
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Template Sequence  HAGEGGHXGTEEIDTIIPVLDELRAQGXKL. NGPLPADTLFQPKYL. . DNADAVLA. . . . . . XYHDQGLPVLKYQGFGRG
Template Known Secondary structure  GGGGGGTT
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   211........220.........230.........240 .........250..... ....260... ......270.........280.
 
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Query Sequence  ANL. . NPERTFPSLFEPVHGSAPDIYGKNIANPIATIWAGAMMLD
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Template Sequence  VNITLGLPFIRTS. . . VDHGTALELAGRGKADVGSFITALNLAIK
Template Known Secondary structure  SSSS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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