Job Description P76251 Confidence 100.00% Date Thu Jan 5 12:21:15 GMT 2012 Rank 12 Aligned Residues 345 % Identity 31% Template d1hqsa_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 1.55

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		M	K	T	M	R	I	A	A	I	P	G	D	G	I	G	K	E	V	L	P	E	G	I	R	V	L	Q	A	A	A	E	R	.	.	.	W	G	F	A	L	S	F	E	Q	M	E	W	A	S	C	E	Y	Y	S	H	H	G	K	M	M	P	D	D	W	H	E	Q	L	S	R	F	D	A	I	Y	F	G	A	V	G
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.													.
Template Conservation																																																	.
Template Sequence		P	N	N	P	I	I	P	F	I	E	G	D	G	T	G	P	D	I	W	N	A	A	S	K	V	L	E	A	A	V	E	K	A	Y	K	G	E	K	K	I	T	W	K	E	V	Y	A	.	G	E	K	A	Y	N	K	T	G	E	W	L	P	A	E	T	L	D	V	I	R	E	Y	F	I	A	I	K	G	P	L	T
Template Known Secondary structure			S	S	B								S	T	T																					T	T	S											.	T								S		S	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	D	T	V	P	D	H	I	S	L	W	G	S	L	L	K	F	R	R	E	F	D	Q	Y	V	N	L	R	P	V	R	L	F	P	G	V	P	C	P	L	A	G	K	Q	P	G	D	I	D	F	Y	V	V	R	E	N	T	E	G	E	Y	S	S	L	G	G	R	V	N	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																				.																.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																				.																.	.
Template Sequence		T	P	V	.	.	.	.	G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	F	V	.	L	R	P	V	R	Y	F	T	G	V	P	S	P	V	K	.	.	R	P	E	D	T	D	M	V	I	F	R	E	N	T	E	D	I	Y	A	G	I	E	Y	A	K	G	S	E	E	V	Q	K	L	I	S	F
Template Known Secondary structure				S	.	.	.	.	S	S	S	S											T	T				.								T	T				S	S	S	.	.		G	G	G										S		G	G	G	G						T	T
Template Predicted Secondary structure					.	.	.	.																				.																.	.
Template SS confidence
		96	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
											149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																																	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																																	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	E	G	T	E	H	E	V	V	I	Q	E	S	V	F	T	R	R	G	V	D	R	I	L	R	Y	A	F	E	L	A	Q	S	R	P	R	K	T	L	T	S	A	T	K	S	N	G	L	A	I	S	M	P	Y	W	D	E	R	V	E	A	M	A	E	N	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.																																																																	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	N	E	L	N	V	N	K	I	R	F	P	E	T	S	G	I	G	I	K	P	V	S	E	E	G	T	S	R	L	V	R	A	A	I	D	Y	A	I	E	H	G	R	K	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	N	W	G	Y	E	L	A	E	K	E	Y	G	D	K	V	F
Template Known Secondary structure						S						S		G	G	G																												T		S								T	T	T	S	T	T	T																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
																												213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	E	I	R	W	D	K	Q	H	I	D	I	L	C	A	R	F	V	M	Q	P	E	R	F	D	V	V	V	A	S	N	L	F	G	D	I	L	S	D	L	G	P	A	C	T	G	T	I	G	I	A	P	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	W	A	Q	Y	D	R	I	A	E	E	Q	G	K	D	A	A	N	K	A	Q	S	E	A	E	A	A	G	K	I	I	I	K	D	S	I	A	D	I	F	L	Q	Q	I	L	T	R	P	N	E	F	D	V	V	A	T	M	N	L	N	G	D	Y	I	S	D	A	L	A	A	Q	V	G	G	I	G	I	A	P	G
Template Known Secondary structure																												T	T																				G	G	G		S																				T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		A	N	L	N	P	E	R	T	F	P	S	L	F	E	P	V	H	G	S	A	P	D	I	Y	G	K	N	I	A	N	P	I	A	T	I	W	A	G	A	M	M	L	D	F	L	G	N	G	D	E	R	F	Q	Q	A	H	N	G	I	L	A	A	I	E	E	V	I	A	H	G	P	K	T	P	D	M	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence								.																																								.	.	.	.	.																										.	.	.	.
Template Conservation								.																																								.	.	.	.	.
Template Sequence		A	N	I	N	Y	E	.	T	G	H	A	I	F	E	A	T	H	G	T	A	P	K	Y	A	G	L	D	K	V	N	P	S	S	V	I	L	S	G	V	L	L	L	E	H	L	G	.	.	.	.	.	W	N	E	A	A	D	L	V	I	K	S	M	E	K	T	I	A	S	K	V	V	T	Y	D	F	A	R	L	M
Template Known Secondary structure						T	T	.	T								S					G	G	G	T	T	T	T		S																	T	.	.	.	.	.																		T	T								T	T	S
Template Predicted Secondary structure								.																																								.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.						.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
				343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	K	G	N	A	T	T	P	Q	V	A	D	A	I	C	K	I	I	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		D	G	A	T	E	V	K	C	S	E	F	G	E	E	L	I	K	N	M	D
Template Known Secondary structure		S	S																T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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