Job Description P76251 Confidence 100.00% Date Thu Jan 5 12:21:15 GMT 2012 Rank 10 Aligned Residues 340 % Identity 36% Template d1g2ua_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 2.10

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		M	R	I	A	A	I	P	G	D	G	I	G	K	E	V	L	P	E	G	I	R	V	L	Q	A	A	A	E	R	W	G	F	A	L	S	F	E	Q	M	E	W	A	S	C	E	Y	Y	S	H	H	G	K	M	M	P	D	D	W	H	E	Q	L	S	R	F	D	A	I	Y	F	G	A	V	G	W	P	D	T	.	.
Query Conservation																																																																																.	.
Alig confidence																																											.																																					.	.
Template Conservation																																											.
Template Sequence		M	K	V	A	V	L	P	G	D	G	I	G	P	E	V	T	E	A	A	L	K	V	L	R	A	L	D	E	A	E	G	L	G	L	A	Y	E	V	F	P	F	.	G	G	A	A	I	D	A	F	G	E	P	F	P	E	P	T	R	K	G	V	E	E	A	E	A	V	L	L	G	S	V	G	G	P	K	W	D	G
Template Known Secondary structure										S	T	T																															.	T								S	S	S	S												S										G	G	G	T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		V	P	D	H	I	S	L	W	G	S	L	L	K	F	R	R	E	F	D	Q	Y	V	N	L	R	P	V	R	L	F	P	G	V	P	.	.	C	P	L	A	G	K	Q	P	G	D	I	D	F	Y	V	V	R	E	N	T	E	G	E	Y	S	S	L	G	G	R	V	N	E	G	T	E	H	E	V	V	I	Q	E	S
Query Conservation																																				.	.
Alig confidence																																				.	.																																			.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		L	P	R	K	I	R	P	E	T	G	L	L	S	L	R	K	S	Q	D	L	F	A	N	L	R	P	A	K	V	F	P	G	L	E	R	L	S	P	L	K	E	E	I	A	R	G	V	D	V	L	I	V	R	E	L	T	G	G	I	Y	F	G	E	P	R	G	M	S	E	A	.	.	.	.	E	A	W	N	T	E
Template Known Secondary structure		S		G	G	G													T	T												T	T		G	G	G	S	S	S						T	T										S		S	T	T	T		S	S					S	S	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	T	R	R	G	V	D	R	I	L	R	Y	A	F	E	L	A	Q	S	R	P	R	K	T	L	T	S	A	T	K	S	N	G	L	A	I	S	M	P	Y	W	D	E	R	V	E	A	M	A	E	N	Y	P	E	I	R	W	D	K	Q	H	I	D	I	L	C	A	R	F	V	M	Q	P	E	R	F	D	V	V
Query Conservation
Alig confidence																							.																		.
Template Conservation																							.																		.
Template Sequence		R	Y	S	K	P	E	V	E	R	V	A	R	V	A	F	E	V	A	R	K	R	.	R	K	H	V	V	S	V	D	K	A	N	V	L	E	V	G	E	.	F	W	R	K	T	V	E	E	V	G	R	G	Y	P	D	V	A	L	E	H	Q	Y	V	D	A	M	A	M	H	L	V	R	S	P	A	R	F	D	V	V
Template Known Secondary structure																					T	T	.	T	S								T	T	T						.											T	T		T	T	S																		G	G	G		S
Template Predicted Secondary structure																							.																		.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		V	A	S	N	L	F	G	D	I	L	S	D	L	G	P	A	C	T	G	T	I	G	I	A	P	S	A	N	L	N	P	E	R	T	F	P	S	L	F	E	P	V	H	G	S	A	P	D	I	Y	G	K	N	I	A	N	P	I	A	T	I	W	A	G	A	M	M	L	D	F	.	L	G	N	G	D	E	R	F	Q
Query Conservation																																																																								.
Alig confidence																																			.	.	.																																			.			.	.	.	.	.
Template Conservation																																			.	.	.																																						.	.	.	.	.
Template Sequence		V	T	G	N	I	F	G	D	I	L	S	D	L	A	S	V	L	P	G	S	L	G	L	L	P	S	A	S	L	G	R	G	T	.	.	.	P	V	F	E	P	V	H	G	S	A	P	D	I	A	G	K	G	I	A	N	P	T	A	A	I	L	S	A	A	M	M	L	E	H	A	F	G	.	.	.	.	.	L	V
Template Known Secondary structure																	T	T	T	S		G	G	G								S	S		.	.	.						S	S				G	G	G	T	T	S	S																					.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.																																						.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.						.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	H	N	G	I	L	A	A	I	E	E	V	I	A	H	G	P	K	T	P	D	M	K	G	N	A	T	T	P	Q	V	A	D	A	I	C	K	I	I	L
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		E	L	A	R	K	V	E	D	A	V	A	K	A	L	L	E	T	.	P	P	P	D	L	G	G	S	A	G	T	E	A	F	T	A	T	V	L	R	H	L	A
Template Known Secondary structure																		S	.			G	G	G	T
Template Predicted Secondary structure																			.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions