Job Description P76251 Confidence 100.00% Date Thu Jan 5 12:21:15 GMT 2012 Rank 8 Aligned Residues 348 % Identity 36% Template c3r8wC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic; PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution Resolution 2.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	M	R	I	A	A	I	P	G	D	G	I	G	K	E	V	L	P	E	G	I	R	V	L	Q	A	A	A	E	R	W	G	F	A	L	S	F	E	Q	M	E	W	A	S	C	E	Y	Y	S	H	H	G	K	M	M	P	D	D	W	H	E	Q	L	S	R	F	D	A	I	Y	F	G	A	V	G	W	P	D	T
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		K	R	Y	T	I	T	L	L	P	G	D	G	I	G	P	E	V	V	S	I	A	K	N	V	L	Q	Q	A	G	S	L	E	G	V	E	F	N	F	R	E	M	P	I	.	G	G	A	A	L	D	L	V	G	V	P	L	P	E	E	T	I	S	A	A	K	E	S	D	A	V	L	L	G	A	I	G	G	Y	K	W
Template Known Secondary structure												S	T	T																			T	T											.									S	S	S	S											S	S
Template Predicted Secondary structure																																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
				83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																		.	.																																		.
Query SS confidence		.	.																																		.	.																																		.
Query Sequence		.	.	V	P	D	H	I	S	L	W	G	S	L	L	K	F	R	R	E	F	D	Q	Y	V	N	L	R	P	V	R	L	F	P	G	V	.	.	P	C	P	L	A	G	K	Q	P	G	D	I	D	F	Y	V	V	R	E	N	T	E	G	E	Y	S	S	L	G	G	R	V	N	.	E	G	T	E	H	E	V	V	I
Query Conservation		.	.																																		.	.																																		.
Alig confidence		.	.																																		.	.																																		.
Template Conservation
Template Sequence		D	N	N	E	K	H	L	R	P	E	K	G	L	L	Q	I	R	A	A	L	K	V	F	A	N	L	R	P	A	T	V	L	P	Q	L	V	D	A	S	T	L	K	R	E	V	A	E	G	V	D	L	M	V	V	R	E	L	T	G	G	I	Y	F	G	E	P	R	G	I	K	T	N	E	N	G	E	E	V	G	F
Template Known Secondary structure			T	S		G	G	G	S													T												G	G	G	G	G	G	S	S	S						T	T										S		S	T	T	T		S	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	S	V	F	T	R	R	G	V	D	R	I	L	R	Y	A	F	E	L	A	Q	S	R	P	R	K	T	L	T	S	A	T	K	S	N	G	L	A	I	S	M	P	Y	W	D	E	R	V	E	A	M	A	E	N	Y	P	E	I	R	W	D	K	Q	H	I	D	I	L	C	A	R	F	V	M	Q	P	E	R	F
Query Conservation
Alig confidence																										.																		.
Template Conservation																										.																		.
Template Sequence		N	T	E	V	Y	A	A	H	E	I	D	R	I	A	R	V	A	F	E	T	A	R	K	R	.	R	G	K	L	C	S	V	D	K	A	N	V	L	E	A	S	I	.	L	W	R	K	R	V	T	A	L	A	S	E	Y	P	D	V	E	L	S	H	M	Y	V	D	N	A	A	M	Q	L	V	R	D	P	K	Q	F
Template Known Secondary structure																								T	T	.	T	S								T	T	T						.										G	G	G	S	T	T	S																		G	G	G
Template Predicted Secondary structure																										.																		.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		D	V	V	V	A	S	N	L	F	G	D	I	L	S	D	L	G	P	A	C	T	G	T	I	G	I	A	P	S	A	N	L	N	P	E	R	T	F	P	S	L	F	E	P	V	H	G	S	A	P	D	I	Y	G	K	N	I	A	N	P	I	A	T	I	W	A	G	A	M	M	L	D	F	.	L	G	N	G	D	E
Query Conservation																																																																											.
Alig confidence																																						.	.																																				.			.	.	.	.
Template Conservation																																						.	.																																							.	.	.	.
Template Sequence		D	T	I	V	T	N	N	I	F	G	D	I	L	S	D	E	A	S	M	I	T	G	S	I	G	M	L	P	S	A	S	L	S	D	S	G	.	.	P	G	L	F	E	P	I	H	G	S	A	P	D	I	A	G	Q	D	K	A	N	P	L	A	T	I	L	S	A	A	M	L	L	K	Y	G	L	G	.	.	.	.
Template Known Secondary structure		S																					S		G	G	G								S	S	S	.	.							S	S				T	T	S	T	T	T	T				T														T	T		.	.	.	.
Template Predicted Secondary structure																																						.	.																																							.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.					.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		R	F	Q	Q	A	H	N	G	I	L	A	A	I	E	E	V	I	A	H	G	P	K	T	P	D	M	K	G	N	A	T	.	.	.	.	T	P	Q	V	A	D	A	I	C	K	I	I	L
Query Conservation																																	.	.	.	.
Alig confidence		.																															.	.	.	.
Template Conservation		.
Template Sequence		.	E	E	K	A	A	K	R	I	E	D	A	V	L	V	A	L	N	N	G	F	R	T	G	D	I	Y	S	A	G	T	K	L	V	G	C	K	E	M	G	E	E	V	L	K	S	V	D
Template Known Secondary structure		.		T	T															T	T				G	G	G			T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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