Job Description P76251 Confidence 100.00% Date Thu Jan 5 12:21:15 GMT 2012 Rank 19 Aligned Residues 327 % Identity 33% Template c3blxL_ PDB info PDB header:oxidoreductase Chain: L: PDB Molecule:isocitrate dehydrogenase [nad] subunit 2; PDBTitle: yeast isocitrate dehydrogenase (apo form) Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	M	R	I	A	A	I	P	G	D	G	I	G	K	E	V	L	P	E	G	I	R	V	L	Q	A	A	A	E	R	W	G	F	A	L	S	F	E	Q	M	E	W	A	S	C	E	Y	Y	S	H	H	G	K	M	M	P	D	D	W	H	E	Q	L	S	R	F	D	A	I	Y	F	G	A	V	G	W	P	D
Query Conservation
Alig confidence																															.	.	.	.												.		.
Template Conservation																															.	.	.	.												.		.
Template Sequence		T	G	K	Y	T	V	S	F	I	E	G	D	G	I	G	P	E	I	S	K	S	V	K	K	I	F	S	A	A	.	.	.	.	N	V	P	I	E	W	E	S	C	D	V	.	S	.	P	I	F	V	N	G	L	T	T	I	P	D	P	A	V	Q	S	I	T	K	N	L	V	A	L	K	G	P	L	A	T	P	H
Template Known Secondary structure		T	S					B					S	T	T														T	T	.	.	.	.	T		S									.		.					T	T																S
Template Predicted Secondary structure																															.	.	.	.												.		.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.		.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	P	D	H	I	S	L	W	G	S	L	L	K	F	R	R	E	F	D	Q	Y	V	N	L	R	P	V	R	L	F	P	G	V	P	C	P	L	A	G	K	Q	P	G	D	I	D	F	Y	V	V	R	E	N	T	E	G	E	Y	S	S	L	G	G	R	V	N	E	G	T	E	H	E	V	V	I	Q	E	S	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																.	.	.	.	.																										.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																.	.	.	.	.																										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	R	S	L	N	L	T	L	R	K	T	F	G	L	F	A	N	V	R	P	A	K	S	I	E	G	F	K	T	T	Y	E	.	.	.	.	.	N	V	D	L	V	L	I	R	E	N	T	E	G	E	Y	S	G	I	E	H	I	V	C	P	G	.	.	.	.	V	V	Q	S	I	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	.											T	T												T	T				S	S		.	.	.	.	.	S										S	S										S	S	T	T	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																.	.	.	.	.																										.	.	.	.
Template SS confidence
										97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		F	T	R	R	G	V	D	R	I	L	R	Y	A	F	E	L	A	Q	S	R	P	R	K	T	L	T	S	A	T	K	S	N	G	L	A	I	S	M	P	Y	W	D	E	R	V	E	A	M	A	E	N	Y	P	E	I	R	W	D	K	Q	H	I	D	I	L	C	A	R	F	V	M	Q	P	E	R	F	D	.	.	V
Query Conservation																																																																															.	.
Alig confidence																																																																															.	.
Template Conservation
Template Sequence		I	T	R	D	A	S	E	R	V	I	R	Y	A	F	E	Y	A	R	A	I	G	R	P	R	V	I	V	V	H	K	S	T	I	Q	R	L	A	D	G	L	F	V	N	V	A	K	E	L	S	K	E	Y	P	D	L	T	L	E	T	E	L	I	D	N	S	V	L	K	V	V	T	N	P	S	A	Y	T	D	A	V
Template Known Secondary structure																					T	T		S							S		T	T	T																T	T		T	T	S																		G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	V	A	S	N	L	F	G	D	I	L	S	D	L	G	P	A	C	.	T	G	T	I	G	I	A	P	S	A	N	L	N	P	E	R	T	F	P	S	L	F	E	P	V	H	G	S	A	P	D	I	Y	G	K	N	I	A	N	P	I	A	T	I	W	A	G	A	M	M	L	D	F	L	G	N	G	D	E	R	F
Query Conservation																				.
Alig confidence																				.																	.	.	.																																					.	.	.	.	.
Template Conservation																																					.	.	.																																					.	.	.	.	.
Template Sequence		S	V	C	P	N	L	Y	G	D	I	L	S	D	L	N	S	G	L	S	A	G	S	L	G	L	T	P	S	A	N	I	G	H	K	I	.	.	.	S	I	F	E	A	V	H	G	S	A	P	D	I	A	G	Q	D	K	A	N	P	T	A	L	L	L	S	S	V	M	M	L	N	H	M	G	.	.	.	.	.	L
Template Known Secondary structure																					T	S	S	S	T	T								S	S		.	.	.							S				G	G	G	T	T	T	T				T															T	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.																																					.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.				.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		Q	Q	A	H	N	G	I	L	A	A	I	E	E	V	I	A	H	G	.	.	P	K	T	P	D	M	K	G	N	A	T	T	P	Q	V	A	D	A	I	C	K	I	I
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		T	N	H	A	D	Q	I	Q	N	A	V	L	S	T	I	A	S	G	P	E	N	R	T	G	D	L	A	G	T	A	T	T	S	S	F	T	E	A	V	I	K	R	L
Template Known Secondary structure											T						T	S	S	T	T	S	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions