Job Description P76251 Confidence 99.04% Date Thu Jan 5 12:21:15 GMT 2012 Rank 29 Aligned Residues 264 % Identity 16% Template c2hi1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 2; PDBTitle: the structure of a putative 4-hydroxythreonine-4-phosphate2 dehydrogenase from salmonella typhimurium. Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.																	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	M	R	I	A	A	I	P	G	D	.	.	G	I	G	K	E	V	L	P	E	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	L	Q	A	A	.	A	E	R	W	G	F	A	L	S	F	E	Q	M	E	W	A	S	C	E	Y	Y	S	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	K	T	V	A	I	T	X	G	D	P	A	G	I	G	P	E	I	I	V	K	A	L	S	E	D	G	L	N	G	A	P	L	V	V	I	G	C	L	A	T	L	K	R	L	Q	A	K	G	I	T	P	N	V	E	L	R	A	I	E	R	V	A	E	A	R	F	A	P	G	I	I	H	V	I	D	E	P	L
Template Known Secondary structure													T	T	T	T										T	S	T	T	T	T	T		S																T	T	S	S									S	S	G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
								53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.													.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	H	H	G	K	M	M	P	D	D	W	H	E	Q	L	S	R	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	I	Y	F	G	A	V	G	W	P	D	T	V	P	D	H	I	S	L	W	G	S	L	L	K	F	R	R	E	F	D	Q	Y	V	N	L	R	P	V	R	L	F	P	G
Query Conservation		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																																					.
Template Sequence		A	Q	P	E	A	L	E	A	G	K	V	Q	A	Q	A	G	D	L	A	Y	R	C	V	K	R	A	T	E	L	A	L	R	G	D	V	Q	A	I	A	T	A	P	L	N	K	E	A	L	H	L	A	G	H	N	Y	P	G	H	T	E	L	L	A	T	L	T	H	.	S	R	D	Y	A	X	V	L	Y	T	D	K
Template Known Secondary structure		S		G	G	G			T	T	S																						T	T	S		S															T	T				S	S									T	T	.											S	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		V	P	C	P	L	A	G	K	Q	P	G	D	I	D	F	Y	V	V	R	E	N	T	E	G	E	Y	S	S	L	G	G	R	V	N	E	G	T	E	H	E	V	V	I	Q	E	S	V	F	T	R	R	G	V	D	R	I	L	R	Y	A	F	E	L	A	Q	S	R	P	R	K	T	L	.	T	S	A	T	K	S	N
Query Conservation																																																																										.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	V	I	H	V	S	T	H	I	A	L	R	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	T	L	S	T	A	R	V	E	T	V	I	G	I	A	D	T	F	L	K	R	V	G	Y	V	K	P	R	I	A	V	A	G	V	N
Template Known Secondary structure							S			S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							T	T		S	S								S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.																														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		194	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure											.										.	.	.	.	.	.	.
Query SS confidence											.										.	.	.	.	.	.	.
Query Sequence		G	L	A	I	S	M	P	Y	W	.	D	E	R	V	E	A	M	A	E	.	.	.	.	.	.	.	N	Y	P	E	I	R	W	D	K	Q	H	I	D	I	L	C	A	R	F	V	M	Q	P	E	R	F	D	V	V	V	A	S	N	L	F	G	D	I	L	S	D	L	G	P	A	C	T	G	T	I	G	I	A	P
Query Conservation											.										.	.	.	.	.	.	.
Alig confidence											.										.	.	.	.	.	.	.							.															.	.									.	.	.	.	.	.																	.
Template Conservation																																		.															.	.									.	.	.	.	.	.																	.
Template Sequence		P	H	A	G	E	N	G	L	F	G	D	E	E	T	R	I	L	T	P	A	I	T	D	A	R	A	K	G	X	D	V	Y	.	G	P	C	P	P	D	T	V	F	L	Q	A	Y	E	.	.	G	Q	Y	D	X	V	V	A	.	.	.	.	.	.	X	Y	H	D	Q	G	H	I	P	L	K	L	L	G	Y	D	.
Template Known Secondary structure		G	G	G	S	S	T	T	S								T										T	T	T					.														T	.	.	T	S		S					.	.	.	.	.	.	S	S															.
Template Predicted Secondary structure																																		.															.	.									.	.	.	.	.	.																	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		266	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		S	A	N	L	.	.	N	P	E	R	T	F	P	S	L	F	E	P	V	H	G	S	A	P	D	I	Y	G	K	N	I	A	N	P	I	A	T	I	W	A	G	A	M	M	L	D
Query Conservation						.	.
Alig confidence						.	.									.	.	.
Template Conservation																.	.	.
Template Sequence		G	V	N	I	T	A	G	L	P	F	I	R	T	S	.	.	.	A	D	H	G	T	A	F	D	I	A	W	T	G	K	A	K	S	E	S	X	A	V	S	I	K	L	A	X	Q
Template Known Secondary structure		S						T	S	S	S					.	.	.		S					T	T	T	T	T	T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions