Job Description P77326 Confidence 2.93% Date Thu Jan 5 12:27:45 GMT 2012 Rank 39 Aligned Residues 50 % Identity 12% Template c2j9wB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vps28-prov protein; PDBTitle: structural insight into the escrt-i-ii link and its role in2 mvb trafficking Resolution 1.30 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	L	I	D	T	A	M	A	S	I	S	L	I	Q	L	K	L	Q	A	G	R	K	L	M	Q	A	E	T	S	R	L	N	T	V	L	D	Y	I	D	A	V	T	A	T	D	T	S	T	A	P	D	V	I
Query Conservation
Alig confidence																									.										.	.													.
Template Conservation																									.										.	.													.
Template Sequence		N	R	C	I	A	D	I	V	S	L	F	I	T	V	M	D	K	L	R	L	E	I	R	.	A	M	D	E	I	Q	P	D	L	.	.	R	E	L	M	E	T	M	N	R	M	S	H	.	L	P	P	D	F	E
Template Known Secondary structure																					T	T			.	B									.	.										S	T	T	.	S		T	T		T
Template Predicted Secondary structure																									.										.	.													.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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